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13_1_20cm_2_scaffold_5556

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_5556_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3..1076
DNA (1074bp) protein (358aa)
tetraacyldisaccharide 4'-kinase (EC:2.7.1.130); K00912 tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
lpxK; Tetraacyldisaccharide 4'-kinase (Lipid A 4'-kinase) (EC:2.7.1.130)
Tetraacyldisaccharide 4'-kinase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SH87_9BACT
13_1_20cm_2_scaffold_5556_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

1073..2068
DNA (996bp) protein (332aa)
ADP-heptose--LPS heptosyltransferase II (EC:2.-.-.-) Tax=GWA2_Rokubacteria_73_35_curated
Lipopolysaccharide heptosyltransferase II n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LK17_CHLTF
lipopolysaccharide heptosyltransferase II
13_1_20cm_2_scaffold_5556_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

2065..3171
DNA (1107bp) protein (369aa)
Glycosyl transferase, group 1 n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IL49_ANADE
group 1 glycosyl transferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
group 1 glycosyl transferase
13_1_20cm_2_scaffold_5556_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3168..4292
DNA (1125bp) protein (375aa)
putative phosphatidylinositol alpha-mannosyltransferase (EC:2.4.1.57) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Glycosyl transferase, group 1 n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IL49_ANADE
group 1 glycosyl transferase
13_1_20cm_2_scaffold_5556_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

4289..5419
DNA (1131bp) protein (377aa)
hypothetical protein n=1 Tax=Nitrospina sp. AB-629-B06 RepID=UPI00037EBCFA
group 1 glycosyl transferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Glycosyl transferase, group 1
13_1_20cm_2_scaffold_5556_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

5612..6724
DNA (1113bp) protein (371aa)
group 1 glycosyl transferase; K02844 UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein n=1 Tax=Nitrospina sp. AB-629-B18 RepID=UPI00036F125B
glycosyl transferase, group 1
13_1_20cm_2_scaffold_5556_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

6756..7337
DNA (582bp) protein (194aa)
histidinol-phosphate phosphatase family protein/HAD-superfamily hydrolase (EC:3.1.3.-); K03273 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] Tax=GWA2_Rokubacteria_73_35
histidinol-phosphate phosphatase family protein/HAD-superfamily hydrolase (EC:3.1.3.-)
D,D-heptose 1,7-bisphosphate phosphatase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIS6_CHLTF
13_1_20cm_2_scaffold_5556_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

7334..8344
DNA (1011bp) protein (337aa)
Phosphofructokinase n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UJ32_MYXSD
D-beta-D-heptose 7-phosphate kinase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
D-beta-D-heptose 7-phosphate kinase
13_1_20cm_2_scaffold_5556_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8355..8819
DNA (465bp) protein (155aa)
Cytidyltransferase-related domain protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LEC4_CHLTF
cytidyltransferase-related domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
cytidyltransferase-related domain-containing protein
13_1_20cm_2_scaffold_5556_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

8816..9481
DNA (666bp) protein (222aa)
ADP-heptose--LPS heptosyltransferase; K02841 heptosyltransferase I [EC:2.4.-.-] Tax=GWA2_Rokubacteria_73_35_curated
Uncharacterized protein n=1 Tax=Nitrospina gracilis 3/211 RepID=M1Z3F6_9BACT
ADP-heptose--LPS heptosyltransferase
13_1_20cm_2_scaffold_5556_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9856..10611
DNA (756bp) protein (252aa)
Glycosyl transferase family 2 n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NH45_DESAR
family 2 glycosyl transferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
family 2 glycosyl transferase
13_1_20cm_2_scaffold_5556_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

10611..11600
DNA (990bp) protein (330aa)
trpS; tryptophanyl-tRNA synthetase (Tryptophan--tRNA ligase) (TrpRS) (EC:6.1.1.2) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
trpS; tryptophanyl-tRNA synthetase (Tryptophan--tRNA ligase) (TrpRS) (EC:6.1.1.2)
Tryptophanyl-tRNA synthetase (Tryptophan--tRNA ligase) (TrpRS) n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML78_9BACT
13_1_20cm_2_scaffold_5556_13
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

11597..12370
DNA (774bp) protein (258aa)
Chromosome segregation and condensation protein ScpA n=2 Tax=Geobacter sulfurreducens RepID=D7AJR2_GEOSK alias=16ft_combo_ws3_scaffold_92_85 id=5225861 tax=16ft_combo_ws3 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria
segregation and condensation protein A; K05896 segregation and condensation protein A Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
chromosome segregation and condensation protein ScpA
13_1_20cm_2_scaffold_5556_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

12354..12953
DNA (600bp) protein (200aa)
Segregation and condensation protein B n=1 Tax=Nitrospina gracilis 3/211 RepID=M1Z8B8_9BACT
scpB; Segregation and condensation protein B Tax=GWA2_Rokubacteria_73_35_curated
scpB; Segregation and condensation protein B
13_1_20cm_2_scaffold_5556_15
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

12991..13635
DNA (645bp) protein (215aa)
pseudouridine synthase; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Pseudouridine synthase n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9R7X1_AMMDK
pseudouridine synthase
13_1_20cm_2_scaffold_5556_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

13705..14766
DNA (1062bp) protein (354aa)
chorismate mutase (EC:4.2.1.51)
Chorismate mutase n=1 Tax=Desulfurobacterium thermolithotrophum (strain DSM 11699 / BSA) RepID=F0S1W4_DESTD
pheA; chorismate mutase/prephenate dehydratase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_20cm_2_scaffold_5556_17
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

14776..15888
DNA (1113bp) protein (371aa)
hisC; histidinol-phosphate aminotransferase (EC:2.6.1.9) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
hisC; histidinol-phosphate aminotransferase (EC:2.6.1.9)
Histidinol-phosphate aminotransferase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MET4_9BACT
13_1_20cm_2_scaffold_5556_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

15885..16733
DNA (849bp) protein (283aa)
prephenate dehydrogenase (EC:1.3.1.12); K04517 prephenate dehydrogenase [EC:1.3.1.12] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
prephenate dehydrogenase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003760FAA
prephenate dehydrogenase
13_1_20cm_2_scaffold_5556_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

16730..18043
DNA (1314bp) protein (438aa)
3-phosphoshikimate 1-carboxyvinyltransferase; K00800 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RDE0_AMMDK
3-phosphoshikimate 1-carboxyvinyltransferase
13_1_20cm_2_scaffold_5556_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

18040..18753
DNA (714bp) protein (238aa)
cytidylate kinase; K00945 cytidylate kinase [EC:2.7.4.14] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E442_GEOLS
13_1_20cm_2_scaffold_5556_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

19060..19713
DNA (654bp) protein (218aa)
cytidylate kinase; K00945 cytidylate kinase [EC:2.7.4.14] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Phospholipid/glycerol acyltransferase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XMY5_9BACT
1-acyl-sn-glycerol-3-phosphate acyltransferase
13_1_20cm_2_scaffold_5556_22
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists


19766..20617
DNA (852bp) protein (284aa)
30S ribosomal protein S1 n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFA1_9BACT
rpsA; 30S ribosomal protein S1 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
rpsA; 30S ribosomal protein S1
Displaying 22 items

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