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13_1_20cm_2_scaffold_6328

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_6328_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1..681)
DNA (681bp) protein (227aa)
Abortive infection protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MRG5_CORCM
abortive infection protein; K07052 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
abortive infection protein
13_1_20cm_2_scaffold_6328_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(698..2101)
DNA (1404bp) protein (468aa)
amidase; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] Tax=GWC2_Rokubacteria_70_16_curated
Amidase n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VNZ3_RHOPX
amidase
13_1_20cm_2_scaffold_6328_3
unknown

Not on your lists

comp(2094..2273)
DNA (180bp) protein (60aa)

This feature has no annotations

13_1_20cm_2_scaffold_6328_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

2280..2732
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=planctomycete KSU-1 RepID=I3IKK7_9PLAN
dioxygenase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
intradiol ring-cleavage dioxygenase
13_1_20cm_2_scaffold_6328_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

2845..3684
DNA (840bp) protein (280aa)
sorbitol dehydrogenase (EC:1.1.1.14) Tax=GWC2_Rokubacteria_70_16_curated
Dehydrogenase n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SJY5_METPP
dehydrogenase
13_1_20cm_2_scaffold_6328_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

3684..3881
DNA (198bp) protein (66aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_20cm_2_scaffold_6328_7
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

3933..4049
DNA (117bp) protein (39aa)
Tax=GWA2_Rokubacteria_73_35_curated
13_1_20cm_2_scaffold_6328_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(4098..4496)
DNA (399bp) protein (133aa)
PAS sensor protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P1L7_9BACT
multi-sensor hybrid histidine kinase Tax=GWA2_Rokubacteria_73_35_curated
histidine kinase
13_1_20cm_2_scaffold_6328_9
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(4599..5660)
DNA (1062bp) protein (354aa)
hypothetical protein n=1 Tax=Mastigocladopsis repens RepID=UPI00037F521A
multi-sensor hybrid histidine kinase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
multi-sensor hybrid histidine kinase
13_1_20cm_2_scaffold_6328_10
unknown

Not on your lists

comp(5754..5846)
DNA (93bp) protein (31aa)

This feature has no annotations

13_1_20cm_2_scaffold_6328_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(5848..6471)
DNA (624bp) protein (208aa)
toluene tolerance protein n=1 Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI00036EEB46
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_20cm_2_scaffold_6328_12
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(6762..8333)
DNA (1572bp) protein (524aa)
Histidine kinase n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5NY93_AROAE
putative histidine kinase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
histidine kinase
13_1_20cm_2_scaffold_6328_13
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(8714..9883)
DNA (1170bp) protein (390aa)
Putative Histidine kinase {ECO:0000313|EMBL:CBE69170.1}; EC=2.7.13.3 {ECO:0000313|EMBL:CBE69170.1};; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Can
Histidine kinase (EC:2.7.13.3)
Putative Histidine kinase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHD8_9BACT
13_1_20cm_2_scaffold_6328_14
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(9889..10239)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Mycobacterium parascrofulaceum ATCC BAA-614 RepID=D5PDT9_9MYCO
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_20cm_2_scaffold_6328_15
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(10239..12224)
DNA (1986bp) protein (662aa)
Iron-sulfur cluster-binding protein n=1 Tax=Sutterella sp. CAG:521 RepID=R7KNM3_9BURK
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_20cm_2_scaffold_6328_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(12221..13216)
DNA (996bp) protein (332aa)
GTPase n=1 Tax=Thermococcus zilligii RepID=UPI00029A1AD9 rbh
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_20cm_2_scaffold_6328_17
unknown

Not on your lists

13289..13660
DNA (372bp) protein (124aa)

This feature has no annotations

13_1_20cm_2_scaffold_6328_18
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(13669..14127)
DNA (459bp) protein (153aa)
id=3366415 Tax=GWA2_Rokubacteria_70_23_curated
13_1_20cm_2_scaffold_6328_19
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(14303..15118)
DNA (816bp) protein (272aa)
id=3877323 Tax=GWA2_Rokubacteria_70_23_curated
13_1_20cm_2_scaffold_6328_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(15179..15673)
DNA (495bp) protein (165aa)
ribosomal-protein-alanine acetyltransferase; K03789 ribosomal-protein-alanine N-acetyltransferase [EC:2.3.1.128] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
rimI; putative ribosomal-protein-alanine acetyltransferase RimI (EC:2.3.1.128)
Acetyltransferases n=1 Tax=Thermoanaerobacter tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) RepID=Q8RC99_THETN
13_1_20cm_2_scaffold_6328_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(15654..16328)
DNA (675bp) protein (225aa)
Peptidase M22, glycoprotease n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFT2_9BACT
peptidase M22, glycoprotease Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
peptidase M22, glycoprotease
13_1_20cm_2_scaffold_6328_22
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

16377..17060
DNA (684bp) protein (228aa)
Orotate phosphoribosyltransferase (OPRT) (OPRTase) (EC:2.4.2.10) Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
Orotate phosphoribosyltransferase (OPRT) (OPRTase) (EC:2.4.2.10)
Putative Orotate phosphoribosyltransferase (OPRT) (OPRTase) n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK97_9BACT
13_1_20cm_2_scaffold_6328_23
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(17412..19229)
DNA (1818bp) protein (606aa)
Putative cobalamin B12-binding/Radical SAM family protein n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HZ58_9BACT rbh
cobalamin B12-binding/Radical SAM family protein Tax=CSP1_6_Rokubacteria
cobalamin B12-binding/Radical SAM family
13_1_20cm_2_scaffold_6328_24
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(19594..20100)
DNA (507bp) protein (169aa)
Transcriptional repressor NrdR n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=NRDR_SYNAS
nrdR; transcriptional regulator NrdR; K07738 transcriptional repressor NrdR Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
nrdR; NrdR family transcriptional regulator
13_1_20cm_2_scaffold_6328_25
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(20117..21364)
DNA (1248bp) protein (416aa)
glyA; Serine hydroxymethyltransferase (glyA) (EC:2.1.2.1) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
glyA; serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DS51_9BACL rbh
13_1_20cm_2_scaffold_6328_26
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(21348..21818)
DNA (471bp) protein (157aa)
RpiB/LacA/LacB family sugar-phosphate isomerase (EC:5.3.1.6); K01808 ribose 5-phosphate isomerase B [EC:5.3.1.6] Tax=GWA2_Rokubacteria_73_35_curated
Ribose 5-phosphate isomerase B n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6P0N9_9FIRM
ribose 5-phosphate isomerase B
13_1_20cm_2_scaffold_6328_27
bacterium YEK0313, Bacteria

Not on your lists

comp(21943..23232)
DNA (1290bp) protein (430aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037E66A0 rbh
Esterase EstB {ECO:0000313|EMBL:CEJ15156.1}; Flags: Precursor;; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
beta-lactamase
13_1_20cm_2_scaffold_6328_28
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(23356..23550)
DNA (195bp) protein (65aa)
Probable tRNA sulfurtransferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCC5_9BACT
thiI; thiamine biosynthesis protein thiI Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
putative thiamine biosynthesis protein ThiI; K03151 thiamine biosynthesis protein ThiI
Displaying 28 items

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