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13_1_20cm_2_scaffold_6340

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_6340_1
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(3..506)
DNA (504bp) protein (168aa)
membrane protein; K07027 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
13_1_20cm_2_scaffold_6340_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(743..1801)
DNA (1059bp) protein (353aa)
thrC_2; threonine synthase (EC:4.2.3.1); K01733 threonine synthase [EC:4.2.3.1] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
thrC_2; threonine synthase (EC:4.2.3.1)
Threonine synthase n=1 Tax=Persephonella marina (strain DSM 14350 / EX-H1) RepID=C0QTN7_PERMH
13_1_20cm_2_scaffold_6340_3
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(1798..3102)
DNA (1305bp) protein (435aa)
hom; homoserine dehydrogenase (EC:1.1.1.3) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
hom; homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKL5_9BACT
13_1_20cm_2_scaffold_6340_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(3148..4317)
DNA (1170bp) protein (390aa)
PLP-dependent aminotransferase, putative aspartate aminotransferase (EC:2.6.1.- 2.6.1.1) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Aminotransferase class I and II n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QGQ6_DESB2
class I and II aminotransferase
13_1_20cm_2_scaffold_6340_5
unknown

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comp(4646..5332)
DNA (687bp) protein (229aa)

This feature has no annotations

13_1_20cm_2_scaffold_6340_6
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(5710..6696)
DNA (987bp) protein (329aa)
oppF; oligopeptide ABC transporter ATP-binding protein (EC:3.6.3.27); K02032 peptide/nickel transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Peptide ABC transporter ATP-binding protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2K3W6_9PROT
peptide ABC transporter ATP-binding protein
13_1_20cm_2_scaffold_6340_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6705..7682)
DNA (978bp) protein (326aa)
oppD; peptide ABC transporter ATP-binding protein (EC:3.6.3.24); K02031 peptide/nickel transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Peptide ABC transporter ATP-binding protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TMZ3_9PROT
peptide ABC transporter ATP-binding protein
13_1_20cm_2_scaffold_6340_8
RBG_13_Planctomycetes_60_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

7998..8591
DNA (594bp) protein (198aa)
Tax=RBG_13_Planctomycetes_60_9_curated
13_1_20cm_2_scaffold_6340_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(8874..9635)
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=candidate division NC10 bacterium UW 659-1-D11 RepID=UPI00037C0337
comL; Competence lipoprotein ComL, putative; K05807 putative lipoprotein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
transporter
13_1_20cm_2_scaffold_6340_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

9735..10988
DNA (1254bp) protein (418aa)
hypothetical protein n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B6DCE2 rbh
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_20cm_2_scaffold_6340_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

11031..12284
DNA (1254bp) protein (418aa)
Multidrug resistance efflux pump n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WA49_9CYAN
multidrug resistance efflux pump Tax=GWA2_Rokubacteria_73_35_curated
multidrug resistance efflux pump
13_1_20cm_2_scaffold_6340_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

12281..13648
DNA (1368bp) protein (456aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E9S1_GEOLS
EmrB/QacA family drug resistance transporter; K03446 MFS transporter, DHA2 family, multidrug resistance protein B Tax=GWA2_Rokubacteria_73_35_curated
DSBA oxidoreductase
Displaying 12 items

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