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13_1_20cm_2_scaffold_8133

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_8133_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

2..229
DNA (228bp) protein (76aa)
gltD; glutamate synthase [NADPH] small chain (EC:1.4.1.13) Tax=GWC2_Rokubacteria_70_16_curated
gltD; glutamate synthase [NADPH] small chain (EC:1.4.1.13)
Glutamate synthase [NADPH] small chain, (NADPH-GOGAT) n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MM41_9BACT
13_1_20cm_2_scaffold_8133_2
unknown

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493..960
DNA (468bp) protein (156aa)

This feature has no annotations

13_1_20cm_2_scaffold_8133_3
Mariniradius saccharolyticus, Mariniradius, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(1000..1731)
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Mariniradius saccharolyticus AK6 RepID=M7XYG4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EMS33527.1}; TaxID=1239962 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Mariniradius.;" source="Mariniradius saccharolyticus
hypothetical protein
13_1_20cm_2_scaffold_8133_4
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(1742..2455)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Methanolobus psychrophilus R15 RepID=K4M7K3_9EURY alias=16ft_combo_ws3_scaffold_2317_3 id=5224514 tax=16ft_combo_ws3 species=Methanolobus psychrophilus R15 genus=Methanolobus taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota
hypothetical protein Tax=RBG_16_RIF_WS3X_71_46_curated
secretion and acid tolerance protein SatD
13_1_20cm_2_scaffold_8133_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2630..2743)
DNA (114bp) protein (38aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_20cm_2_scaffold_8133_6
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(3317..4339)
DNA (1023bp) protein (341aa)
Cyclic pyranopterin monophosphate synthase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PDK0_9BACT
moaA; molybdenum cofactor biosynthesis protein A; K03639 molybdenum cofactor biosynthesis protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
moaA; molybdenum cofactor biosynthesis protein A
13_1_20cm_2_scaffold_8133_7
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(4339..4869)
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Desulfovibrio oxyclinae RepID=UPI00035D268B
radical SAM domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
radical SAM domain-containing protein
13_1_20cm_2_scaffold_8133_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(5046..5987)
DNA (942bp) protein (314aa)
Fe-S oxidoreductase n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LR52_SYNAS
radical SAM protein Tax=GWA2_Rokubacteria_73_35_curated
Fe-S oxidoreductase
13_1_20cm_2_scaffold_8133_9
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(6038..7081)
DNA (1044bp) protein (348aa)
RNA-splicing ligase RtcB n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFV6_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein
13_1_20cm_2_scaffold_8133_10
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(7065..7325)
DNA (261bp) protein (87aa)
hypothetical protein; K14415 tRNA-splicing ligase RtcB [EC:6.5.1.3] Tax=GWC2_RIF_CHLX_73_18_curated
RNA-splicing ligase RtcB n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFV6_9BACT
hypothetical protein
13_1_20cm_2_scaffold_8133_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7337..8128)
DNA (792bp) protein (264aa)
lgt; prolipoprotein diacylglyceryl transferase (EC:2.4.99.-) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
lgt; prolipoprotein diacylglyceryl transferase (EC:2.4.99.-)
Prolipoprotein diacylglyceryl transferase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFQ3_9BACT
13_1_20cm_2_scaffold_8133_trna_3
unknown

Not on your lists

comp(8167..8250)
DNA (84bp)
transferRNA
13_1_20cm_2_scaffold_8133_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(8262..8633)
DNA (372bp) protein (124aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
13_1_20cm_2_scaffold_8133_trna_2
unknown

Not on your lists

comp(8677..8749)
DNA (73bp)
transferRNA
13_1_20cm_2_scaffold_8133_trna_1
unknown

Not on your lists

comp(8786..8857)
DNA (72bp)
transferRNA
13_1_20cm_2_scaffold_8133_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(8884..9882)
DNA (999bp) protein (333aa)
galactose-1-phosphate uridylyltransferase; K00965 UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
galactose-1-phosphate uridylyltransferase (EC:2.7.7.12)
Galactose-1-phosphate uridylyltransferase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IUV2_KORVE alias=16ft_combo_ws3_scaffold_136_56 id=5223567 tax=16ft_combo_ws3 species=Koribacter versatilis (strain Ellin345) genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria
13_1_20cm_2_scaffold_8133_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(10012..11001)
DNA (990bp) protein (330aa)
gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; K00057 glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] Tax=GWA2_Rokubacteria_73_35_curated
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=GPDA_KORVE
gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
13_1_20cm_2_scaffold_8133_15
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(11089..11691)
DNA (603bp) protein (201aa)
Glycerol-3-phosphate acyltransferase; K08591 glycerol-3-phosphate acyltransferase PlsY [EC:2.3.1.15] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Glycerol-3-phosphate acyltransferase n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CL35_DESK7
Glycerol-3-phosphate acyltransferase
13_1_20cm_2_scaffold_8133_16
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(11688..12185)
DNA (498bp) protein (166aa)
pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (Phosphatidylglycerophosphate synthase) (PGP synthase) (EC:2.7.8.5) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DUQ7_DESRL
CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase
Displaying 19 items

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