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13_1_20cm_2_scaffold_834

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_834_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(30..1322)
DNA (1293bp) protein (431aa)
serS; Seryl-tRNA synthetase (EC:6.1.1.11) Tax=GWC2_Rokubacteria_70_16_curated
seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase n=1 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8ADG7_THEID
13_1_20cm_2_scaffold_834_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists


comp(1329..3770)
DNA (2442bp) protein (814aa)
gyrA; DNA gyrase subunit A (EC:5.99.1.3) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
gyrA; DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLW1_9BACT
13_1_20cm_2_scaffold_834_3
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(3786..6164)
DNA (2379bp) protein (793aa)
DNA gyrase B subunit (EC:5.99.1.3); K02470 DNA gyrase subunit B [EC:5.99.1.3] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
DNA gyrase B subunit (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E8P0_GEOLS
13_1_20cm_2_scaffold_834_4
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(6161..6364)
DNA (204bp) protein (68aa)
DNA replication and repair protein RecF; K03629 DNA replication and repair protein RecF Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
13_1_20cm_2_scaffold_834_5
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(7217..8311)
DNA (1095bp) protein (365aa)
dnaN; DNA polymerase III subunit beta (EC:2.7.7.7) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
DNA polymerase III subunit beta n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLW3_9BACT
DNA polymerase III subunit beta
13_1_20cm_2_scaffold_834_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(8475..9794)
DNA (1320bp) protein (440aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHJ6_9BACT
dnaA; chromosomal replication initiator protein dnaA Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
dnaA; chromosomal replication initiator protein dnaA
13_1_20cm_2_scaffold_834_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

10269..10523
DNA (255bp) protein (85aa)
putative ribonuclease P protein component; K03536 ribonuclease P protein component [EC:3.1.26.5]
hypothetical protein n=1 Tax=Nocardiopsis halophila RepID=UPI0003474C2B
Ribonuclease P protein component Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
13_1_20cm_2_scaffold_834_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

10520..10747
DNA (228bp) protein (76aa)
Putative membrane protein insertion efficiency factor n=1 Tax=Selenomonas ruminantium subsp. lactilytica (strain NBRC 103574 / TAM6421) RepID=I0GUU5_SELRL
hypothetical protein; K08998 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_20cm_2_scaffold_834_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

10750..12438
DNA (1689bp) protein (563aa)
Membrane protein insertase YidC n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=YIDC_SYNAS
oxaA; inner membrane protein OxaA; K03217 preprotein translocase subunit YidC Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
13_1_20cm_2_scaffold_834_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

12643..13092
DNA (450bp) protein (150aa)
methyltransferase GidB; K03501 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=RSMG_SYNAS
methyltransferase
13_1_20cm_2_scaffold_834_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

13140..13946
DNA (807bp) protein (269aa)
Cobyrinic acid ac-diamide synthase n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CKR0_DESK7
soj1; sporulation initiation inhibitor protein Soj Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_20cm_2_scaffold_834_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

13939..14793
DNA (855bp) protein (285aa)
ParBc, ParB-like nuclease domain n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67J37_SYMTH
chromosome segregation DNA-binding protein; K03497 chromosome partitioning protein, ParB family Tax=GWA2_Rokubacteria_73_35_curated
ParB-like nuclease domain-containing protein
13_1_20cm_2_scaffold_834_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

14820..15902
DNA (1083bp) protein (361aa)
tRNA-specific 2-thiouridylase mnmA; K00566 tRNA-specific 2-thiouridylase [EC:2.8.1.-] Tax=GWA2_Rokubacteria_73_35_curated
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CL99_DESK7
tRNA-specific 2-thiouridylase mnmA
13_1_20cm_2_scaffold_834_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

15994..16599
DNA (606bp) protein (202aa)
Sodium-transporting two-sector ATPase (EC:3.6.3.15) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Sodium-transporting two-sector ATPase (EC:3.6.3.15)
ATP synthase subunit b n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLX6_9BACT
13_1_20cm_2_scaffold_834_15
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

16606..17154
DNA (549bp) protein (183aa)
F0F1 ATP synthase subunit delta (EC:3.6.3.14); K02113 F-type H+-transporting ATPase subunit delta [EC:3.6.3.14] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
hypothetical protein n=1 Tax=Anaeromusa acidaminophila RepID=UPI00036D9E4F
ATP synthase F0F1 subunit delta
13_1_20cm_2_scaffold_834_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

17151..18677
DNA (1527bp) protein (509aa)
atpA; ATP synthase subunit alpha, membrane-bound, F1 sector (EC:3.6.3.14) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
atpA; ATP synthase subunit alpha, membrane-bound, F1 sector (EC:3.6.3.14)
ATP synthase subunit alpha n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLX8_9BACT
13_1_20cm_2_scaffold_834_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

18691..19575
DNA (885bp) protein (295aa)
atpG; ATP synthase subunit gamma, membrane-bound, F1 sector (EC:3.6.3.14) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
atpG; ATP synthase subunit gamma, membrane-bound, F1 sector (EC:3.6.3.14)
ATP synthase gamma chain n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLX9_9BACT
13_1_20cm_2_scaffold_834_18
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

19572..20993
DNA (1422bp) protein (474aa)
atpD; ATP synthase subunit beta, membrane-bound, F1 sector (EC:3.6.3.14) Tax=GWA2_Rokubacteria_73_35_curated
atpD; ATP synthase subunit beta, membrane-bound, F1 sector (EC:3.6.3.14)
ATP synthase subunit beta n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLY0_9BACT
13_1_20cm_2_scaffold_834_19
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

20993..21406
DNA (414bp) protein (138aa)
atpC; ATP synthase subunit epsilon, membrane-bound, F1 sector (EC:3.6.3.14) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
atpC; ATP synthase subunit epsilon, membrane-bound, F1 sector (EC:3.6.3.14)
ATP synthase epsilon chain n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLY1_9BACT
13_1_20cm_2_scaffold_834_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

21581..21967
DNA (387bp) protein (129aa)
Phosphate regulon transcriptional regulatory protein PhoB n=1 Tax=Oceanibaculum indicum P24 RepID=K2J5X2_9PROT
ompR; response regulator receiver Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
13_1_20cm_2_scaffold_834_21
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

21952..22299
DNA (348bp) protein (116aa)
Diguanylate cyclase and metal dependent phosphohydrolase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CAG3_SPHTD
PAS/PAC sensor-containing diguanylate cyclase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
diguanylate cyclase and metal dependent phosphohydrolase
Displaying 21 items

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