ggKbase home page

13_1_20cm_2_scaffold_2128_12

Organism: 13_1_20CM_2_Rokubacteria_69_58

near complete RP 46 / 55 MC: 1 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(8037..8831)

Top 3 Functional Annotations

Value Algorithm Source
anti-sigma factor n=1 Tax=Pseudomonas RepID=UPI0003825D47 similarity UNIREF
DB: UNIREF100
  • Identity: 37.0
  • Coverage: 265.0
  • Bit_score: 136
  • Evalue 5.10e-29
Anti-sigma factor {ECO:0000313|EMBL:KDD65138.1}; TaxID=1419583 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mandelii PD UNIPROT
DB: UniProtKB
  • Identity: 37.2
  • Coverage: 266.0
  • Bit_score: 137
  • Evalue 3.20e-29
transmembrane transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 35.8
  • Coverage: 271.0
  • Bit_score: 135
  • Evalue 1.90e-29

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas mandelii → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 795
ATGGACTGCGAGGACGTCAGGACCTACTTGCTCGACGACCACCGGGGGCAGCTCGCCCCGGAGCTCGCGCGCGAAGTCCGGGCCCACGTCGAGCGGTGCGCCGCGTGCGCCCACGACGACGCCGCCGAGCACGCGCTGAGCGAGCTCCTCGAGCGCCGCCTGCCGCAGCATCCCGCGCCCCTCGCGCTCAAGCGCCGGCTCGCGGCGCAGTGGCCGGCGCCCGGCGCGGCGCCCGCGCCCTGGTGGCCCCGGTGGCGCCGCGCCGTGGCGCCGGCGCTCGCCGCCGCGCTCGTGCTCGCCGTTGCCGCGCCGTGGCTGACCGGGCGCCTTCCCGCTTCCGGTCGGGGCGACGGCGCCCAGGCGCTCGTCGCCGAGGCCGTCAACGATCACCTGCGGGTGCTCCTGAGCGAGCACCCGCTCGAGGTCGAGAGCGGCGGCATCCATCAGGTCAAGCCCTGGTTCGCGGGCCGGCTCGACTTCGCGCCCGTCGTTCCGTTCGGCGGCGACGTCGAGTTCCCGCTGAAGGGCGGGGCGGTCGGCTGGTTCGTGGACCGCAAGGCGGCGGTCCTCGTCTACCAGCGGCGCCTCCACCCGATCTCGCTCTTCGTGTTCCGCGCCGACGGGCTGCCGTGGCCCGCGCGCGGCGGGGAGCGGATCGGCGGCGTGGACGCCTACCGGCAGACGGCGCGGGGGTTCACGGTCGTCCTCTGGCGCACGGGCGATCTCGGCTACGCCCTCGTGTCCGACCTGGACCCGAAGGAGCTCGCCACGTTCGCGTCGAAGCTCGTCGGCTGA
PROTEIN sequence
Length: 265
MDCEDVRTYLLDDHRGQLAPELAREVRAHVERCAACAHDDAAEHALSELLERRLPQHPAPLALKRRLAAQWPAPGAAPAPWWPRWRRAVAPALAAALVLAVAAPWLTGRLPASGRGDGAQALVAEAVNDHLRVLLSEHPLEVESGGIHQVKPWFAGRLDFAPVVPFGGDVEFPLKGGAVGWFVDRKAAVLVYQRRLHPISLFVFRADGLPWPARGGERIGGVDAYRQTARGFTVVLWRTGDLGYALVSDLDPKELATFASKLVG*