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13_1_20cm_2_scaffold_4260_10

Organism: 13_1_20CM_2_Rokubacteria_69_58

near complete RP 46 / 55 MC: 1 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 7067..7636

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma 29 subunit, SigE n=1 Tax=Chthonomonas calidirosea T49 RepID=S0ETP2_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 39.6
  • Coverage: 182.0
  • Bit_score: 119
  • Evalue 2.70e-24
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=290315 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlor UNIPROT
DB: UniProtKB
  • Identity: 39.5
  • Coverage: 172.0
  • Bit_score: 120
  • Evalue 2.20e-24
RNA polymerase sigma factor RpoE similarity KEGG
DB: KEGG
  • Identity: 39.5
  • Coverage: 172.0
  • Bit_score: 120
  • Evalue 4.50e-25

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Taxonomy

Chlorobium limicola → Chlorobium → Chlorobiales → Chlorobia → Chlorobi → Bacteria

Sequences

DNA sequence
Length: 570
TTGGACAGCAGATCTGAATTCCAGGACTTGGTCCATAAGCACCTCAATTCCCTGTACAACTATGCGCTCGTGCTCGCACGGCAGGATGCCGAGGACCTCCTTCAGGAGAGCCTCGTCCGCGCCTGGGAGGCCTTTCACGCGTTCGACCGGTCGCAGAGCTTCAAGCCATGGGTCTTCACGATCATGAGGAACGCCCAGATCGACCGGCAGCGGCGACGGCGGGCGCACCCCGCGGACGCGCCGCTCGGAGATGAGAAGGAGGCCGAGCCGGTGGTGGAAAGTCCGCTCTGCTCCATTCCGCTCGCCCCCGAGGACATCCTGCTTCGTCGCGAGGCGGTCGAGCAGGTGCGGGAGGCGATCCGCCACCTGCCGCCGCTCCTCAGAGAGATCGTCGAGCTCCGCGACATCGAGGGTCTCTCCTACCACGAGATCGCGACGATCCTCAGCCGCCCCGTGGGAACCGTGATGTCGCGACTCTATCGGGGCAGGAACCTGCTTCGCACCTATCTCGTCGAGCCGCCGCAGCGGCCTGACGGGAAGGAGATCGGCGTGCGAAATGATGGACTGTAG
PROTEIN sequence
Length: 190
LDSRSEFQDLVHKHLNSLYNYALVLARQDAEDLLQESLVRAWEAFHAFDRSQSFKPWVFTIMRNAQIDRQRRRRAHPADAPLGDEKEAEPVVESPLCSIPLAPEDILLRREAVEQVREAIRHLPPLLREIVELRDIEGLSYHEIATILSRPVGTVMSRLYRGRNLLRTYLVEPPQRPDGKEIGVRNDGL*