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13_1_20cm_2_scaffold_4260

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_4260_1
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1..1008)
DNA (1008bp) protein (336aa)
3-oxoacyl-(acyl-carrier-protein) synthase II (EC:2.3.1.41); K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Desmospora sp. 8437 RepID=F5SCR3_9BACL
3-oxoacyl-(acyl-carrier-protein) synthase 2
13_1_20cm_2_scaffold_4260_2
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(1012..1248)
DNA (237bp) protein (79aa)
acyl carrier protein n=1 Tax=Desulfurobacterium sp. TC5-1 RepID=UPI0003B39E9D
acyl carrier protein; K02078 acyl carrier protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
acpP; acyl carrier protein
13_1_20cm_2_scaffold_4260_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(1278..2030)
DNA (753bp) protein (251aa)
3-oxoacyl-(acyl-carrier-protein) reductase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1APT6_PELPD
3-oxoacyl-(acyl-carrier-protein) reductase
13_1_20cm_2_scaffold_4260_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2166..3107)
DNA (942bp) protein (314aa)
malonyl CoA-acyl carrier protein transacylase; K00645 [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9P3W4_9DELT
fabD; malonyl-CoA--acyl carrier protein transacylase
13_1_20cm_2_scaffold_4260_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(3184..4164)
DNA (981bp) protein (327aa)
FabH; 3-oxoacyl-(acyl-carrier-protein) synthase III; K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D1E9_PELTS
FabH; 3-oxoacyl-(acyl-carrier-protein) synthase III
13_1_20cm_2_scaffold_4260_6
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(4161..5159)
DNA (999bp) protein (333aa)
putative glycerol-3-phosphate acyltransferase PlsX; K03621 glycerol-3-phosphate acyltransferase PlsX [EC:2.3.1.15] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Phosphate acyltransferase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFG7_9BACT
plsX; fatty acid/phospholipid synthesis protein, methyltransferase domain
13_1_20cm_2_scaffold_4260_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists


comp(5182..5364)
DNA (183bp) protein (61aa)
rpmF; 50S ribosomal protein L32 RpmF Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
50S ribosomal protein L32; K02911 large subunit ribosomal protein L32 alias=RBG1_1829,RBG1_C00001G01829 id=1251387 tax=RBG1 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes
rpmF; 50S ribosomal protein L32 RpmF
13_1_20cm_2_scaffold_4260_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5377..5886)
DNA (510bp) protein (170aa)
Putative uncharacterized protein n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QJL3_DESB2
hypothetical protein; K07040 uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein
13_1_20cm_2_scaffold_4260_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

6005..6853
DNA (849bp) protein (283aa)
peptidase M48, Ste24p; K03799 heat shock protein HtpX [EC:3.4.24.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Protease HtpX homolog n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1AU16_PELPD
peptidase M48, Ste24p
13_1_20cm_2_scaffold_4260_10
Chlorobium limicola, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

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7067..7636
DNA (570bp) protein (190aa)
RNA polymerase, sigma 29 subunit, SigE n=1 Tax=Chthonomonas calidirosea T49 RepID=S0ETP2_9BACT
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=290315 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlor
RNA polymerase sigma factor RpoE
13_1_20cm_2_scaffold_4260_11
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

7623..8444
DNA (822bp) protein (274aa)
Transmembrane anti-sigma factor n=1 Tax=Burkholderia phenoliruptrix BR3459a RepID=K0DPS4_9BURK
transmembrane transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
transmembrane anti-sigma factor
13_1_20cm_2_scaffold_4260_12
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

8477..9199
DNA (723bp) protein (241aa)
Putative lipoprotein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MG39_9BACT
Putative lipoprotein {ECO:0000313|EMBL:CBE68720.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
lipoprotein
13_1_20cm_2_scaffold_4260_13
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

9245..10471
DNA (1227bp) protein (409aa)
Metallophosphoesterase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MG40_9BACT
Metallophosphoesterase {ECO:0000313|EMBL:CBE68721.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
metallophosphoesterase
13_1_20cm_2_scaffold_4260_14
RBG_19FT_COMBO_Nitrospirae_55_12_curated, Nitrospirae, Bacteria

Not on your lists

10510..10971
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MG41_9BACT
hypothetical protein Tax=RBG_19FT_COMBO_Nitrospirae_55_12_curated
hypothetical protein
13_1_20cm_2_scaffold_4260_15
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10989..11789
DNA (801bp) protein (267aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HEB0_ANADF
Uncharacterized protein {ECO:0000313|EMBL:ABS27056.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" s
hypothetical protein
Displaying 15 items

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