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13_1_20cm_2_scaffold_1652

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_1652_1
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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comp(3..1361)
DNA (1359bp) protein (453aa)
glyS; glycine--tRNA ligase (EC:6.1.1.14) Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Glycine--tRNA ligase n=4 Tax=Dehalococcoides mccartyi RepID=D3SIN3_DEHSG
glycyl-tRNA synthetase
13_1_20cm_2_scaffold_1652_2
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(1358..2191)
DNA (834bp) protein (278aa)
DNA repair protein RecO; K03584 DNA repair protein RecO (recombination protein O) Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
recO; DNA repair protein RecO; K03584 DNA repair protein RecO (recombination protein O) alias=RBG9_41_47,RBG9_C00041G00047 id=1245837 tax=RBG9 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi
DNA repair protein RecO
13_1_20cm_2_scaffold_1652_3
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

2201..3262
DNA (1062bp) protein (354aa)
polyprenyl synthetase; K13787 geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Polyprenyl synthetase n=1 Tax=uncultured prokaryote RepID=H5SCN8_9ZZZZ
polyprenyl synthetase
13_1_20cm_2_scaffold_1652_4
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

3275..3769
DNA (495bp) protein (165aa)
Membrane-flanked domain protein n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q0X5_CATAD
membrane-flanked domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_20cm_2_scaffold_1652_5
unknown

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comp(3770..3937)
DNA (168bp) protein (56aa)

This feature has no annotations

13_1_20cm_2_scaffold_1652_6
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(4114..4521)
DNA (408bp) protein (136aa)
Cdd; cytidine deaminase; K01489 cytidine deaminase [EC:3.5.4.5] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Cytidine deaminase n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RAN3_AMMDK
cytidine deaminase
13_1_20cm_2_scaffold_1652_7
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(4518..5828)
DNA (1311bp) protein (437aa)
hypothetical protein n=1 Tax=Orenia marismortui RepID=UPI00035ECC0C
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Hemolysins and related proteins containing CBS domains
13_1_20cm_2_scaffold_1652_8
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(5837..7225)
DNA (1389bp) protein (463aa)
glmU; UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase (EC:2.3.1.157 2.7.7.23); K04042 bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosp
glmU; UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase (EC:2.3.1.157 2.7.7.23)
Bifunctional protein GlmU n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N385_ANATU rbh
13_1_20cm_2_scaffold_1652_trna_1
unknown

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comp(7240..7310)
DNA (71bp)
transferRNA
13_1_20cm_2_scaffold_1652_9
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(7698..8564)
DNA (867bp) protein (289aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148); K00919 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Aneurinibacillus aneurinilyticus ATCC 12856 RepID=U1YDE3_ANEAE
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
13_1_20cm_2_scaffold_1652_10
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists


comp(8561..9445)
DNA (885bp) protein (295aa)
ksgA; dimethyladenosine transferase (EC:2.1.1.-); K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
ksgA; dimethyladenosine transferase (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L1P4_THERP
13_1_20cm_2_scaffold_1652_11
CG_CPR16-01, CG_CPR16, Bacteria

Not on your lists

comp(9477..10400)
DNA (924bp) protein (308aa)
Putative uncharacterized protein n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RME9_MOOTA
g5 domain transglycosylase Tax=CG_CPR16-01
hypothetical protein
13_1_20cm_2_scaffold_1652_12
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(10517..11428)
DNA (912bp) protein (304aa)
UTP-glucose-1-phosphate uridylyltransferase; K00963 UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
UTP-glucose-1-phosphate uridylyltransferase n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WVH0_KYRT2
UTP-glucose-1-phosphate uridylyltransferase
13_1_20cm_2_scaffold_1652_13
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(11425..13353)
DNA (1929bp) protein (643aa)
Putative uncharacterized protein n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IGM8_9CHLR rbh
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
13_1_20cm_2_scaffold_1652_14
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(13350..14519)
DNA (1170bp) protein (390aa)
alanine racemase (EC:5.1.1.1); K01775 alanine racemase [EC:5.1.1.1] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Alanine racemase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6P0F6_9FIRM
alanine racemase
13_1_20cm_2_scaffold_1652_15
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(14516..15370)
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0HZQ4_CALAS
carbohydrate kinase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
13_1_20cm_2_scaffold_1652_16
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(15406..15780)
DNA (375bp) protein (125aa)
acpS; 4'-phosphopantetheinyl transferase (EC:2.7.8.7) Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
acpS; 4'-phosphopantetheinyl transferase (EC:2.7.8.7)
Holo-[acyl-carrier-protein] synthase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TP60_9CHLR
13_1_20cm_2_scaffold_1652_17
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(15890..17734)
DNA (1845bp) protein (615aa)
glmS; glucosamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16); K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_cur
glmS; glucosamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16)
glutamine amidotransferase n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035FE553
13_1_20cm_2_scaffold_1652_18
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(17734..19062)
DNA (1329bp) protein (443aa)
glmM; phosphoglucosamine mutase; K03431 phosphoglucosamine mutase [EC:5.4.2.10] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Phosphoglucosamine mutase n=2 Tax=Desulforudis audaxviator (strain MP104C) RepID=GLMM_DESAP
glmM; phosphoglucosamine mutase
13_1_20cm_2_scaffold_1652_19
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(19059..20321)
DNA (1263bp) protein (421aa)
YbbR family protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HQR3_9FIRM alias=ACD58_12242.8726.11G0003,ACD58_12242.8726.11_3,ACD58_C00001G00003 id=86165 tax=ACD58 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes organism_group=ACD58 organism_desc=ACD58
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
YbbR family protein
13_1_20cm_2_scaffold_1652_20
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(20325..21155)
DNA (831bp) protein (277aa)
Putative uncharacterized protein n=1 Tax=Alicyclobacillus acidocaldarius (strain Tc-4-1) RepID=F8ILD3_ALIAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
13_1_20cm_2_scaffold_1652_21
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(21159..21443)
DNA (285bp) protein (95aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Displaying 22 items

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