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13_1_20cm_2_scaffold_1696

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_1696_1
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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1..147
DNA (147bp) protein (49aa)
beta-lactamase domain-containing protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_20cm_2_scaffold_1696_2
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

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480..1475
DNA (996bp) protein (332aa)
Putative uncharacterized protein Tax=RBG_16_RIF_CHLX_72_14_curated
13_1_20cm_2_scaffold_1696_3
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists


1608..1919
DNA (312bp) protein (104aa)
50S ribosomal protein L21 n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJ53_9BACT
50S ribosomal protein L21 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
rplU; 50S ribosomal protein L21
13_1_20cm_2_scaffold_1696_4
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists


1922..2179
DNA (258bp) protein (86aa)
50S ribosomal protein L27 n=1 Tax=Micavibrio aeruginosavorus (strain ARL-13) RepID=G2KRH3_MICAA
50S ribosomal protein L27; K02899 large subunit ribosomal protein L27 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
rpmA; 50S ribosomal protein L27
13_1_20cm_2_scaffold_1696_5
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists


2194..2433
DNA (240bp) protein (80aa)
50S ribosomal protein L31P; K02909 large subunit ribosomal protein L31 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
rpmE; 50S ribosomal protein L31
50S ribosomal protein L31; K02909 large subunit ribosomal protein L31 alias=scaffold_4_161,RBG2_C00004G00161 id=1241850 tax=RBG2 species=Dehalogenimonas lykanthroporepellens genus=Dehalogenimonas taxon_order=unknown taxon_class=Dehalococcoidetes phylum=Chloroflexi
13_1_20cm_2_scaffold_1696_6
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

2522..3361
DNA (840bp) protein (280aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
dly:Dehly_0204 hypothetical protein alias=scaffold_4_162,RBG2_C00004G00162 id=1241851 tax=RBG2 species=Dehalogenimonas lykanthroporepellens genus=Dehalogenimonas taxon_order=unknown taxon_class=Dehalococcoidetes phylum=Chloroflexi
hypothetical protein
13_1_20cm_2_scaffold_1696_7
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

3358..4464
DNA (1107bp) protein (369aa)
Peptide chain release factor 1 n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CCP5_THET1
peptide chain release factor 1; K02835 peptide chain release factor 1 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
peptide chain release factor 1
13_1_20cm_2_scaffold_1696_8
marine actinobacterium MedAcidi-G3, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4497..5816
DNA (1320bp) protein (440aa)
D-phenylhydantoinase (EC:3.5.2.-)
Putative D-phenylhydantoinase n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4F1S5_MODMB
Uncharacterized protein {ECO:0000313|EMBL:KIE51218.1}; TaxID=1550402 species="Bacteria; Actinobacteria.;" source="marine actinobacterium MedAcidi-G3.;"
13_1_20cm_2_scaffold_1696_9
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

5834..6355
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C1K3_SPHTD
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_20cm_2_scaffold_1696_10
unknown

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6472..7935
DNA (1464bp) protein (488aa)

This feature has no annotations

13_1_20cm_2_scaffold_1696_11
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(8400..8732)
DNA (333bp) protein (111aa)
Predicted exonuclease of the beta-lactamase fold involved in RNA processing n=1 Tax=uncultured gamma proteobacterium RepID=Q2YZG4_9GAMM
beta-lactamase domain-containing protein; K07576 metallo-beta-lactamase family protein Tax=RBG_16_RIF_CHLX_70_13_curated
zinc-dependent endoribonuclease
13_1_20cm_2_scaffold_1696_12
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

9247..9831
DNA (585bp) protein (195aa)
GCN5-related N-acetyltransferase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CDN6_THET1
N-acetyltransferase GCN5 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
N-acetyltransferase GCN5
13_1_20cm_2_scaffold_1696_13
RBG_13_Chloroflexi_52_14_curated, Chloroflexi, Bacteria

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9894..11342
DNA (1449bp) protein (483aa)
peptidoglycan-binding LysM Tax=RBG_13_Chloroflexi_52_14_curated
conserved repeat domain protein alias=scaffold_15_9,RBG2_C00015G00009 id=1242870 tax=RBG2 species=Methanohalophilus mahii genus=Methanohalophilus taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota
peptidoglycan-binding LysM
13_1_20cm_2_scaffold_1696_14
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

11437..12318
DNA (882bp) protein (294aa)
thymidylate synthase; K00560 thymidylate synthase [EC:2.1.1.45] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
thymidylate synthase (EC:2.1.1.45); K00560 thymidylate synthase [EC:2.1.1.45] alias=gwa2_scaffold_1422_41 id=5046293 tax=GW2011_AR3 species=Arcobacter nitrofigilis genus=Arcobacter taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria organism_desc=gwa2_.43_13b
thymidylate synthase (EC:2.1.1.45)
13_1_20cm_2_scaffold_1696_15
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12315..12809
DNA (495bp) protein (165aa)
Dihydrofolate reductase n=1 Tax=Spiribacter salinus M19-40 RepID=R4VHW1_9GAMM
dihydrofolate reductase
Tax=BJP_IG2102_Gammaproteobacteria_62_140
13_1_20cm_2_scaffold_1696_16
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

12817..13914
DNA (1098bp) protein (366aa)
acuC; Histone deacetylase 1 (EC:3.5.1.98); K04768 acetoin utilization protein AcuC Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Histone deacetylase superfamily protein n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SIW1_9BACT
histone deacetylase
13_1_20cm_2_scaffold_1696_17
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

13911..14612
DNA (702bp) protein (234aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
13_1_20cm_2_scaffold_1696_18
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

14615..14959
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D8T8_SINAD
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
hypothetical protein
13_1_20cm_2_scaffold_1696_19
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

14988..16934
DNA (1947bp) protein (649aa)
AMP-dependent synthetase and ligase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C7F2_SPHTD
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ACZ39798.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobac
AMP-dependent synthetase and ligase
13_1_20cm_2_scaffold_1696_20
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(16939..17583)
DNA (645bp) protein (215aa)
CAAX amino terminal protease family n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0L1S7_METHD
CAAX amino terminal protease family {ECO:0000313|EMBL:AGB50338.1}; Flags: Precursor;; TaxID=867904 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethy
CAAX amino terminal protease family
13_1_20cm_2_scaffold_1696_21
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17634..18308)
DNA (675bp) protein (225aa)
d-beta-hydroxybutyrate dehydrogenase (EC:1.1.1.30)
D-beta-hydroxybutyrate dehydrogenase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QTB5_9DELT rbh
D-beta-hydroxybutyrate dehydrogenase {ECO:0000313|EMBL:EPX64534.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.
13_1_20cm_2_scaffold_1696_22
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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18384..19130
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Streptomyces RepID=UPI00037B2018
Amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:EWT05035.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporang
ABC transporter-like protein
13_1_20cm_2_scaffold_1696_23
Meiothermus silvanus, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

19123..19815
DNA (693bp) protein (231aa)
ABC transporter related protein n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BBG7_MEISD
ABC transporter related protein {ECO:0000313|EMBL:ADH64429.1}; TaxID=526227 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus silvanus (stra
ABC transporter-like protein
13_1_20cm_2_scaffold_1696_24
Meiothermus silvanus, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

19841..21097
DNA (1257bp) protein (419aa)
Putative uncharacterized protein n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BBG8_MEISD rbh
Uncharacterized protein {ECO:0000313|EMBL:ADH64430.1}; Flags: Precursor;; TaxID=526227 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus sil
hypothetical protein
13_1_20cm_2_scaffold_1696_25
Meiothermus silvanus, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

21142..22017
DNA (876bp) protein (292aa)
Inner-membrane translocator n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BBG9_MEISD
Inner-membrane translocator {ECO:0000313|EMBL:ADH64431.1}; TaxID=526227 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus silvanus (strain A
inner-membrane translocator
13_1_20cm_2_scaffold_1696_26
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22014..22955
DNA (942bp) protein (314aa)
branched-chain amino acid ABC transporter permease n=1 Tax=Ornithinimicrobium pekingense RepID=UPI0003B732E2 rbh
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EGD43141.1}; TaxID=408672 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidace
inner-membrane translocator
13_1_20cm_2_scaffold_1696_27
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(22963..23412)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CEB2_THET1
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
13_1_20cm_2_scaffold_1696_28
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

23435..23917
DNA (483bp) protein (161aa)
thioesterase superfamily protein; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Thioesterase superfamily protein n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V542_TERSS
TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family
13_1_20cm_2_scaffold_1696_29
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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23960..25075
DNA (1116bp) protein (372aa)
Acyl-coa dehydrogenase n=1 Tax=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) RepID=B0TAL3_HELMI
acyl-CoA dehydrogenase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
acyl-CoA dehydrogenase
13_1_20cm_2_scaffold_1696_30
unknown

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25160..25807
DNA (648bp) protein (216aa)

This feature has no annotations

Displaying 30 items

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