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13_1_20cm_2_scaffold_3006

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_3006_1
unknown

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35..295
DNA (261bp) protein (87aa)

This feature has no annotations

13_1_20cm_2_scaffold_3006_2
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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comp(292..1272)
DNA (981bp) protein (327aa)
ornithine cyclodeaminase (EC:4.3.1.12); K01750 ornithine cyclodeaminase [EC:4.3.1.12] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
ornithine cyclodeaminase (EC:4.3.1.12)
ornithine cyclodeaminase n=1 Tax=Streptomyces canus RepID=UPI0003607F59
13_1_20cm_2_scaffold_3006_3
actinobacterium acAcidi, Actinobacteria, Actinobacteria, Bacteria

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comp(1299..1934)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4ELP2_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:KGA06556.1}; TaxID=1504320 species="Bacteria; Actinobacteria.;" source="actinobacterium acAcidi.;"
hypothetical protein
13_1_20cm_2_scaffold_3006_4
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

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1946..2245
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Streptomyces sp. HmicA12 RepID=UPI0003735F92
hypothetical protein Tax=GWC2_RIF_CHLX_73_18_curated
hypothetical protein
13_1_20cm_2_scaffold_3006_5
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

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comp(2324..2695)
DNA (372bp) protein (124aa)
Response regulator receiver protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KWK1_HALNC
response regulator receiver domain-containing protein Tax=GWC2_Nitrospirae_57_9_curated
response regulator receiver protein
13_1_20cm_2_scaffold_3006_6
RLO_RIF02_62_27, RIF2, Bacteria

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comp(2704..3795)
DNA (1092bp) protein (364aa)
PAS/PAC sensor hybrid histidine kinase (EC:2.7.3.-); K00936 [EC:2.7.3.-] Tax=RIFCSPLOWO2_12_FULL_RIF02_62_27_curated
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI000347038A
PAS/PAC sensor hybrid histidine kinase
13_1_20cm_2_scaffold_3006_7
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3982..4758
DNA (777bp) protein (259aa)
Phosphate binding protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EBM0_9CLOT
Phosphate binding protein {ECO:0000313|EMBL:EEG31138.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentos
phosphate-binding protein PstS
13_1_20cm_2_scaffold_3006_8
RLO_PLX_64_10, Bacteria

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4779..6674
DNA (1896bp) protein (632aa)
multi-sensor signal transduction histidine kinase (EC:2.7.13.3) Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
multi-sensor signal transduction histidine kinase (EC:2.7.13.3)
Multi-sensor signal transduction histidine kinase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5USV9_ROSS1
13_1_20cm_2_scaffold_3006_9
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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6656..7003
DNA (348bp) protein (116aa)
multi-sensor signal transduction histidine kinase (EC:2.7.13.3) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Two-component hybrid sensor and regulator n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZFP4_9BACT
signal transduction histidine kinase
13_1_20cm_2_scaffold_3006_10
unknown

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comp(7000..7155)
DNA (156bp) protein (52aa)

This feature has no annotations

13_1_20cm_2_scaffold_3006_11
Nitrospina gracilis, Nitrospina, Nitrospinales, Nitrospinia, Nitrospinae, Bacteria

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7419..8495
DNA (1077bp) protein (359aa)
Response regulator receiver sensor signal transduction histidine kinase n=1 Tax=Nitrospina gracilis 3/211 RepID=M1ZC64_9BACT
Response regulator receiver sensor signal transduction histidine kinase {ECO:0000313|EMBL:CCQ90883.1}; TaxID=1266370 species="Bacteria; Nitrospinae; Nitrospinia; Nitrospinales; Nitrospinaceae; Nitrosp
response regulator receiver protein
13_1_20cm_2_scaffold_3006_12
Cellulophaga algicola, Cellulophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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8492..9979
DNA (1488bp) protein (496aa)
HEAT domain containing protein n=1 Tax=Cellulophaga algicola (strain DSM 14237 / IC166 / ACAM 630) RepID=E6XBB6_CELAD
HEAT domain containing protein {ECO:0000313|EMBL:ADV49980.1}; TaxID=688270 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Cellulophaga.;" source="Cellulophaga a
heat domain containing protein
13_1_20cm_2_scaffold_3006_13
unknown

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9982..10755
DNA (774bp) protein (258aa)

This feature has no annotations

13_1_20cm_2_scaffold_3006_14
Alkalilimnicola ehrlichii, Alkalilimnicola, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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10755..12065
DNA (1311bp) protein (437aa)
Response regulator receiver modulated metal dependent phosphohydrolase n=1 Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0A5W8_ALKEH
Response regulator receiver modulated metal dependent phosphohydrolase {ECO:0000313|EMBL:ABI57769.1}; TaxID=187272 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodosp
response regulator receiver modulated metal dependent phosphohydrolase
13_1_20cm_2_scaffold_3006_15
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

12062..12787
DNA (726bp) protein (242aa)
Two component transcriptional regulator, LuxR family protein n=1 Tax=Streptomyces bingchenggensis (strain BCW-1) RepID=D7CG95_STRBB
two component LuxR family transcriptional regulator Tax=CSP1_4_Chloroflexi
two component LuxR family transcriptional regulator
13_1_20cm_2_scaffold_3006_16
Pelotomaculum thermopropionicum, Pelotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12850..13221
DNA (372bp) protein (124aa)
Response regulator n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D153_PELTS
Response regulator {ECO:0000313|EMBL:BAF60012.1}; TaxID=370438 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Pelotomaculum.;" source="Pelotomaculum thermopropionicum (strai
OmpR; response regulator
13_1_20cm_2_scaffold_3006_17

Not on your lists

13227..14189
DNA (963bp) protein (321aa)
Response regulator receiver modulated metal dependent phosphohydrolase n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IS75_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KKM81448.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
metal dependent phosphohydrolase
13_1_20cm_2_scaffold_3006_18
unknown

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comp(14158..14634)
DNA (477bp) protein (159aa)

This feature has no annotations

13_1_20cm_2_scaffold_3006_19
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14664..15044
DNA (381bp) protein (127aa)
Uracil-DNA glycosylase n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CRE3_MYXFH
DNA polymerase {ECO:0000313|EMBL:AKF80475.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulv
uracil-DNA glycosylase
Displaying 19 items

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