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13_1_20cm_2_scaffold_3475

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_3475_1
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

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comp(256..510)
DNA (255bp) protein (85aa)
id=4341237 Tax=RBG_16_Actinobacteria_67_10_curated
13_1_20cm_2_scaffold_3475_2
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(556..954)
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Pleurocapsa sp. PCC 7319 RepID=UPI000345431B
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
histidine triad (HIT) protein
13_1_20cm_2_scaffold_3475_3
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(987..2129)
DNA (1143bp) protein (381aa)
citrate synthase (EC:2.3.3.1)
Citrate synthase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AT04_RUBXD
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter
13_1_20cm_2_scaffold_3475_4
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(2317..3384)
DNA (1068bp) protein (356aa)
allantoate amidohydrolase; K06016 N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.87] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
allantoate amidohydrolase (EC:3.5.1.87)
N-carbamoyl-L-amino acid hydrolase n=1 Tax=Caenispirillum salinarum AK4 RepID=K9GTB8_9PROT
13_1_20cm_2_scaffold_3475_5
unknown

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comp(3531..4061)
DNA (531bp) protein (177aa)

This feature has no annotations

13_1_20cm_2_scaffold_3475_6
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

4123..4695
DNA (573bp) protein (191aa)
RNA polymerase sigma factor FliA n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82S67_NITEU
RNA polymerase sigma-28 subunit FliA/WhiG; K02405 RNA polymerase sigma factor for flagellar operon FliA Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
fliA; RNA polymerase sigma-70 factor family protein
13_1_20cm_2_scaffold_3475_7
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

4741..5109
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Frankia sp. BCU110501 RepID=UPI00035E4E9D
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
13_1_20cm_2_scaffold_3475_8
unknown

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comp(5092..5526)
DNA (435bp) protein (145aa)

This feature has no annotations

13_1_20cm_2_scaffold_3475_9
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(5574..6176)
DNA (603bp) protein (201aa)
rpe; d-ribulose-5-phosphate 3-epimerase (EC:5.1.3.1); K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
rpe; pentose-5-phosphate-3-epimerase; K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1] alias=scaffold_4_23,RBG2_C00004G00023 id=1241712 tax=RBG2 species=Anoxybacillus flavithermus genus=Anoxybacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes
ribulose-phosphate 3-epimerase
13_1_20cm_2_scaffold_3475_10
unknown

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comp(6232..7326)
DNA (1095bp) protein (365aa)

This feature has no annotations

13_1_20cm_2_scaffold_3475_11
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

7566..9071
DNA (1506bp) protein (502aa)
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:ACZ42342.1}; EC=1.1.1.95 {ECO:0000313|EMBL:ACZ42342.1};; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain AT
D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95)
D-3-phosphoglycerate dehydrogenase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CC27_THET1
13_1_20cm_2_scaffold_3475_12
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(9068..9553)
DNA (486bp) protein (162aa)
Putative Methyltransferase type 11 n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z264_9ACTN
type 11 methyltransferase Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
type 11 methyltransferase
Displaying 12 items

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