ggKbase home page

13_1_20cm_2_scaffold_9637

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_9637_1
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(36..830)
DNA (795bp) protein (265aa)
Putative integral membrane protein DUF125 n=1 Tax=uncultured marine microorganism HF4000_APKG5H11 RepID=B3T8K1_9ZZZZ
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
13_1_20cm_2_scaffold_9637_2
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(866..1573)
DNA (708bp) protein (236aa)
Rhodanese-related sulfurtransferase n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4ES92_MODMB
Rhodanese-related sulfurtransferase {ECO:0000313|EMBL:CCH86255.1}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter mari
Rhodanese-related sulfurtransferase
13_1_20cm_2_scaffold_9637_3

Not on your lists

1650..2465
DNA (816bp) protein (272aa)
Uncharacterized protein {ECO:0000313|EMBL:AIA15716.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_1_20cm_2_scaffold_9637_4
Burkholderia xenovorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2544..2813
DNA (270bp) protein (90aa)
GAF sensor hybrid histidine kinase {ECO:0000313|EMBL:ABE35722.1}; EC=2.7.13.3 {ECO:0000313|EMBL:ABE35722.1};; TaxID=266265 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkh
GAF sensor hybrid histidine kinase (EC:2.7.3.-)
GAF sensor hybrid histidine kinase n=1 Tax=Burkholderia xenovorans (strain LB400) RepID=Q13JL7_BURXL
13_1_20cm_2_scaffold_9637_5
Desulfosporosinus orientis, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2791..3219
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Desulfurispora thermophila RepID=UPI000361474A
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:AET70205.1}; TaxID=768706 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcace
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
13_1_20cm_2_scaffold_9637_6
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3155..4297)
DNA (1143bp) protein (381aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AXF1_RUBXD
13_1_20cm_2_scaffold_9637_7
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(4322..6040)
DNA (1719bp) protein (573aa)
methylmalonyl-CoA mutase (EC:5.4.99.2); K01848 methylmalonyl-CoA mutase, N-terminal domain [EC:5.4.99.2] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
methylmalonyl-CoA mutase (EC:5.4.99.2)
methylmalonyl-CoA mutase n=1 Tax=Streptomyces sulphureus RepID=UPI00037D9EA7
13_1_20cm_2_scaffold_9637_8
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(6054..7376)
DNA (1323bp) protein (441aa)
phenylacetate--CoA ligase; K01912 phenylacetate-CoA ligase [EC:6.2.1.30] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
phenylacetate--CoA ligase n=1 Tax=Arhodomonas aquaeolei RepID=UPI000367681E
phenylacetate--CoA ligase
13_1_20cm_2_scaffold_9637_9
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

7636..8415
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L258_THERP
isoleucine patch superfamily enzyme, carbonic anhydrase/acetyltransferase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
13_1_20cm_2_scaffold_9637_10
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

8495..9946
DNA (1452bp) protein (484aa)
histidine ammonia-lyase (EC:4.3.1.3); K01745 histidine ammonia-lyase [EC:4.3.1.3] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hutH; histidine ammonia-lyase (EC:4.3.1.3)
Histidine ammonia-lyase n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FL70_STIAD
13_1_20cm_2_scaffold_9637_11
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

9948..10688
DNA (741bp) protein (247aa)
Haloacid dehalogenase domain protein hydrolase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U5W6_9CHLR rbh
Haloacid dehalogenase domain protein hydrolase {ECO:0000313|EMBL:EFH80377.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" sour
HAD-superfamily hydrolase
13_1_20cm_2_scaffold_9637_12
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10673..11221
DNA (549bp) protein (183aa)
DNA-3-methyladenine glycosylase I (EC:3.2.2.20); K01246 DNA-3-methyladenine glycosylase I [EC:3.2.2.20] Tax=CG_Rhodocyc_01
DNA-3-methyladenine glycosylase I (EC:3.2.2.20)
DNA-3-methyladenine glycosylase I n=1 Tax=Geobacter sp. (strain M18) RepID=E8WJT3_GEOS8
13_1_20cm_2_scaffold_9637_13
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(11429..12697)
DNA (1269bp) protein (423aa)
beta-ketoadipyl CoA thiolase (EC:2.3.1.174) Tax=RBG_16_RIF_CHLX_72_14_curated
beta-ketoadipyl CoA thiolase (EC:2.3.1.174)
Beta-ketoadipyl CoA thiolase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TH90_9CHLR
13_1_20cm_2_scaffold_9637_14
unknown

Not on your lists

12702..13631
DNA (930bp) protein (310aa)

This feature has no annotations

13_1_20cm_2_scaffold_9637_15
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13643..14434
DNA (792bp) protein (264aa)
3-oxoadipate enol-lactonase n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2KF59_9BURK
3-oxoadipate enol-lactonase {ECO:0000313|EMBL:ESJ25088.1}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp
alpha/beta hydrolase
13_1_20cm_2_scaffold_9637_16
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

14431..16092
DNA (1662bp) protein (554aa)
urocanate hydratase (EC:4.2.1.49); K01712 urocanate hydratase [EC:4.2.1.49] Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
urocanate hydratase (EC:4.2.1.49)
Urocanate hydratase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C2S6_SPHTD
13_1_20cm_2_scaffold_9637_17
BJP_08E140C01_Anaerolineales_40_8, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

16125..16505
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2AP84_9BACT
hypothetical protein
Tax=BJP_08E140C01_Anaerolineales_40_8
Displaying 17 items

View Taxonomy