ggKbase home page

13_1_20cm_2_scaffold_2097_4

Organism: 13_1_20CM_2_Chloroflexi_70_9

partial RP 28 / 55 BSCG 31 / 51 ASCG 10 / 38
Location: comp(1364..2107)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A; K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated UNIPROT
DB: UniProtKB
  • Identity: 68.5
  • Coverage: 248.0
  • Bit_score: 331
  • Evalue 1.10e-87
truA; tRNA pseudouridine synthase A (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 46.9
  • Coverage: 241.0
  • Bit_score: 207
  • Evalue 4.80e-51
tRNA pseudouridine synthase A n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHD2_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 46.9
  • Coverage: 241.0
  • Bit_score: 207
  • Evalue 1.30e-50

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_RIF_CHLX_71_12 → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 744
GTGGCCTACGACGGGACGCGCTACGCCGGATTCCAGGTGCAGCCGAACGCGCCGACGGTGCAGGCGGAGCTCGAGCGCGCGCTCGCCTCGGTCTGCGACGAAGCCATCAGGGTCACCGGCGCGGGGCGGACCGACTCGGGGGTGCACGCGACAGGGCAGGTCATCGACTTCCGGACGGCGAGCGCGCTGGACGGAAAGACGATCGGGCGGGGGGTCAACGCCCTTCTCCCGCAGGACATCGCGGTCTCGGAGCTCGAGCCGGCGGAGGAGGACTTCCACGCACGGTTCTCCGCGACGGGCCGCACATACGAATACCGGATCCGGAACGCGCCGGAGCGTCTGCCGCTCGAGCGGCTGCGGGAGCTCCAGCTCGCGTCGCCGCTGGACGTCGCGGCCATGCGCGAAGCGAGCGCGTGGCTGATCGGCCGGCGCGACTTCTCGGCGTTCGCGACGGGCAGGGGCGGCGTCCGGACGGTCCGGCGCGCGGACTGGTGCGCGGACGGTACGCTGCTGCGGTTCGAGATCGCGGCGGACGCGTTCCTCCGCGGGATGGTCCGCGCGATCGTCGGGACCCTCCTCTGGGTGGGCCGCGGGAAGATCGACGCCGGGCGGTTCGGCGAGATCATCGCGTCGGGCGACCGCTCGCGGGCCGGTCCGAGCGCACCGGCGAACGGCCTGTGCCTCGTCGCGGTGGAATACGGGGAAGGCACACGAAGGATCGACGAAGACGAGGCGAATGAGTAG
PROTEIN sequence
Length: 248
VAYDGTRYAGFQVQPNAPTVQAELERALASVCDEAIRVTGAGRTDSGVHATGQVIDFRTASALDGKTIGRGVNALLPQDIAVSELEPAEEDFHARFSATGRTYEYRIRNAPERLPLERLRELQLASPLDVAAMREASAWLIGRRDFSAFATGRGGVRTVRRADWCADGTLLRFEIAADAFLRGMVRAIVGTLLWVGRGKIDAGRFGEIIASGDRSRAGPSAPANGLCLVAVEYGEGTRRIDEDEANE*