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13_1_20cm_2_scaffold_2097

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_2097_1
unknown

Not on your lists

comp(1..384)
DNA (384bp) protein (128aa)

This feature has no annotations

13_1_20cm_2_scaffold_2097_2
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists


comp(418..813)
DNA (396bp) protein (132aa)
30S ribosomal protein S9 n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8G6P4_CHLAD
30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
30S ribosomal protein S9
13_1_20cm_2_scaffold_2097_3
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists


comp(874..1299)
DNA (426bp) protein (142aa)
50S ribosomal protein L13 n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C2N6_SPHTD
rplM; 50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
50S ribosomal protein L13
13_1_20cm_2_scaffold_2097_4
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(1364..2107)
DNA (744bp) protein (248aa)
tRNA pseudouridine synthase A; K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
truA; tRNA pseudouridine synthase A (EC:5.4.99.12)
tRNA pseudouridine synthase A n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PHD2_9BACT
13_1_20cm_2_scaffold_2097_5
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists


comp(2130..2660)
DNA (531bp) protein (177aa)
50S ribosomal protein L17 n=1 Tax=Geobacter sp. (strain M21) RepID=RL17_GEOSM
rplQ; 50S ribosomal protein L17; K02879 large subunit ribosomal protein L17 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
50S ribosomal protein L17
13_1_20cm_2_scaffold_2097_6
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(2664..3701)
DNA (1038bp) protein (346aa)
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6THB7_9CHLR
13_1_20cm_2_scaffold_2097_7
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists


comp(3734..4357)
DNA (624bp) protein (208aa)
30S ribosomal protein S4 A n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=RS4A_SYMTH
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
rpsD; 30S ribosomal protein S4
13_1_20cm_2_scaffold_2097_8
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists


comp(4411..4920)
DNA (510bp) protein (170aa)
30S ribosomal protein S11 n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=RS11_ROSS1
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
30S ribosomal protein S11
13_1_20cm_2_scaffold_2097_9
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists


comp(4920..5303)
DNA (384bp) protein (128aa)
30S ribosomal protein S13 n=2 Tax=Firmicutes RepID=R6QZ97_9FIRM
rpsM; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
rpsM; 30S ribosomal protein S13
13_1_20cm_2_scaffold_2097_10
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(5305..5418)
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=1 Tax=Leptolyngbya sp. PCC 7375 RepID=K9EWM7_9CYAN
rpmJ, rpl36; 50S ribosomal protein L36; K02919 large subunit ribosomal protein L36 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
rpmJ; 50S ribosomal protein L36
13_1_20cm_2_scaffold_2097_11
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(5418..5651)
DNA (234bp) protein (78aa)
Translation initiation factor IF-1 n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CWN3_9CLOT
Translation initiation factor IF-1; K02518 translation initiation factor IF-1 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Translation initiation factor IF-1
13_1_20cm_2_scaffold_2097_12
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(5747..6523)
DNA (777bp) protein (259aa)
methionine aminopeptidase; K01265 methionyl aminopeptidase [EC:3.4.11.18] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
map; methionine aminopeptidase (EC:3.4.11.18)
Methionyl aminopeptidase n=1 Tax=uncultured prokaryote RepID=H5S8S7_9ZZZZ
13_1_20cm_2_scaffold_2097_13
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(6534..7100)
DNA (567bp) protein (189aa)
adk; adenylate kinase (EC:2.7.4.3); K00939 adenylate kinase [EC:2.7.4.3] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
adk; adenylate kinase (EC:2.7.4.3)
hypothetical protein n=1 Tax=Meiothermus timidus RepID=UPI000381ABF8
13_1_20cm_2_scaffold_2097_14
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists


comp(7259..8542)
DNA (1284bp) protein (428aa)
Protein translocase subunit SecY n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KZW8_THERP rbh
preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
preprotein translocase subunit SecY
13_1_20cm_2_scaffold_2097_15
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists


comp(8555..9001)
DNA (447bp) protein (149aa)
50S ribosomal protein L15 n=1 Tax=Olsenella profusa F0195 RepID=U2T013_9ACTN
50S ribosomal protein L15; K02876 large subunit ribosomal protein L15 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
rplO; 50S ribosomal protein L15
13_1_20cm_2_scaffold_2097_16
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists


comp(8998..9183)
DNA (186bp) protein (62aa)
50S ribosomal protein L30 n=2 Tax=Rhodothermus marinus RepID=D0MGX2_RHOM4
50S ribosomal protein L30; K02907 large subunit ribosomal protein L30 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
50S ribosomal protein L30
13_1_20cm_2_scaffold_2097_17
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists


comp(9180..9680)
DNA (501bp) protein (167aa)
30S ribosomal protein S5 n=1 Tax=Moorella thermoacetica (strain ATCC 39073) RepID=RS5_MOOTA
rpsE; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
rpsE; 30S ribosomal protein S5
13_1_20cm_2_scaffold_2097_18
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists


comp(9680..10033)
DNA (354bp) protein (118aa)
50S ribosomal protein L18 n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SKY4_THEM7
50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
50S ribosomal protein L18
13_1_20cm_2_scaffold_2097_19
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists


comp(10037..10624)
DNA (588bp) protein (196aa)
50S ribosomal protein L6 n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C2M0_SPHTD
50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
50S ribosomal protein L6
13_1_20cm_2_scaffold_2097_20
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists


comp(10634..11137)
DNA (504bp) protein (168aa)
30S ribosomal protein S8 n=1 Tax=Nodosilinea nodulosa RepID=UPI0003775B9B
30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
30S ribosomal protein S8
13_1_20cm_2_scaffold_2097_21
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists


comp(11137..11322)
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6THD1_9CHLR
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364, ECO:0000256|SAAS:SAAS00014984}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae;
rpsN; 30S ribosomal protein S14
13_1_20cm_2_scaffold_2097_22
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists


comp(11337..11894)
DNA (558bp) protein (186aa)
50S ribosomal protein L5 n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=RL5_SYMTH
rplE; 50S ribosomal protein L5 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
rplE; 50S ribosomal protein L5
13_1_20cm_2_scaffold_2097_23
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists


comp(11891..12229)
DNA (339bp) protein (113aa)
50S ribosomal protein L24 n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=RL24_CARHZ
rplX; 50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
rplX; 50S ribosomal protein L24
13_1_20cm_2_scaffold_2097_24
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists


comp(12230..13171)
DNA (942bp) protein (314aa)
50S ribosomal protein L14 n=1 Tax=Saccharopolyspora spinosa RepID=UPI00023786E1
50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
rplN; 50S ribosomal protein L14
Displaying 24 items

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