ggKbase home page

13_1_20cm_2_scaffold_1183

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_1183_1
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..363)
DNA (363bp) protein (121aa)
Transglycosylase SLT domain-containing protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MNN3_CORCM
Transglycosylase SLT domain-containing protein {ECO:0000313|EMBL:AFE09432.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Coral
mltD2; transglycosylase
13_1_20cm_2_scaffold_1183_2
unknown

Not on your lists

comp(583..897)
DNA (315bp) protein (105aa)

This feature has no annotations

13_1_20cm_2_scaffold_1183_3
unknown

Not on your lists

1130..1786
DNA (657bp) protein (219aa)

This feature has no annotations

13_1_20cm_2_scaffold_1183_4
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1917..4235
DNA (2319bp) protein (773aa)
CDP-alcohol phosphatidyltransferase n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U0S7_MYXSD
CDP-alcohol phosphatidyltransferase {ECO:0000313|EMBL:AGC41818.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" so
CDP-alcohol phosphatidyltransferase
13_1_20cm_2_scaffold_1183_5
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4333..5676
DNA (1344bp) protein (448aa)
aminotransferase (EC:2.6.1.-) Tax=RBG_16_Anaeromyxobacter_69_14_curated
aminotransferase (EC:2.6.1.-)
Aminotransferase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK61_9BACT
13_1_20cm_2_scaffold_1183_6
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5686..8172
DNA (2487bp) protein (829aa)
Exporters of the RND superfamily n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HIB8_ANADF rbh
Membrane protein, inferred for ABFAE pathway {ECO:0000313|EMBL:KFE71328.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyala
RND efflux transporter
13_1_20cm_2_scaffold_1183_7
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8173..9129
DNA (957bp) protein (319aa)
PAP2 family protein n=1 Tax=Streptomyces clavuligerus (strain ATCC 27064 / DSM 738 / JCM 4710 / NBRC 13307 / NCIMB 12785 / NRRL 3585 / VKM Ac-602) RepID=D5SJA6_STRC2
PAP2 family protein Tax=RBG_16_Anaeromyxobacter_69_14_curated
PAP2 family protein
13_1_20cm_2_scaffold_1183_8
RifOxyA12_full_Deltaproteobacteria_61_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9181..10719
DNA (1539bp) protein (513aa)
lytic transglycosylase, SLT, LysM and LysM domain-containing; K08307 membrane-bound lytic murein transglycosylase D [EC:3.2.1.-] Tax=RifOxyA12_full_Deltaproteobacteria_61_11_curated
Lytic transglycosylase catalytic n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SEF4_RHOMR
Lytic transglycosylase catalytic
13_1_20cm_2_scaffold_1183_9
Deinococcus sp. RL, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(10726..11583)
DNA (858bp) protein (286aa)
Dihydroorotate dehydrogenase (quinone) {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00084821}; EC=1.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00084821};; DHOdehase {ECO:00
Dihydroorotate dehydrogenase (quinone) n=1 Tax=Deinococcus gobiensis (strain DSM 21396 / JCM 16679 / CGMCC 1.7299 / I-0) RepID=H8GRP5_DEIGI
pyrD; dihydroorotate dehydrogenase 2
13_1_20cm_2_scaffold_1183_10
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

11827..12774
DNA (948bp) protein (316aa)
hisZ; ATP phosphoribosyltransferase regulatory subunit (EC:6.1.1.21)
ATP phosphoribosyltransferase regulatory subunit n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=HISZ_GEODF
hisS; histidyl-tRNA synthetase; K02502 ATP phosphoribosyltransferase regulatory subunit Tax=CG_Anaero_02
13_1_20cm_2_scaffold_1183_11
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

13048..13323
DNA (276bp) protein (92aa)
hisG; ATP phosphoribosyltransferase (EC:2.4.2.17)
ATP phosphoribosyltransferase n=1 Tax=Persephonella marina (strain DSM 14350 / EX-H1) RepID=C0QR65_PERMH
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00008790}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_01018};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_01018};; E
13_1_20cm_2_scaffold_1183_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

13320..14600
DNA (1281bp) protein (427aa)
hisD; histidinol dehydrogenase (EC:1.1.1.23) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
histidinol dehydrogenase n=1 Tax=Synechococcus sp. CB0205 RepID=UPI0002001606
histidinol dehydrogenase
13_1_20cm_2_scaffold_1183_13
RBG_16_Aminicenantes_63_16_curated, Aminicenantes, Bacteria

Not on your lists

14597..15673
DNA (1077bp) protein (359aa)
hisC; histidinol-phosphate aminotransferase; K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9] Tax=RBG_16_Aminicenantes_63_16_curated
histidinol-phosphate aminotransferase (EC:2.6.1.9)
Histidinol-phosphate aminotransferase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LFI7_CHLTF
13_1_20cm_2_scaffold_1183_14
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15670..16527
DNA (858bp) protein (286aa)
HAD-superfamily hydrolase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M796_9EURY
HAD-superfamily hydrolase {ECO:0000313|EMBL:EMA41571.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 1
13_1_20cm_2_scaffold_1183_15
RIFOXYD2_FULL_OD1_Magasanikbacteria_41_14_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

16820..17053
DNA (234bp) protein (78aa)
hisB; imidazoleglycerol-phosphate dehydratase; K01089 imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15] Tax=RIFOXYD2_FULL_OD1_Magasanikbacteria_41_14_curated
imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
Imidazoleglycerol-phosphate dehydratase n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HYV0_9BACT
13_1_20cm_2_scaffold_1183_16
Paenibacillus dendritiformis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17050..17649
DNA (600bp) protein (200aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Paenibacillus dendritiformis C454 RepID=H3SLI6_9BACL
Imidazole glycerol phosphate synthase subunit hisH
13_1_20cm_2_scaffold_1183_17
Acidomonas methanolica, Acidomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17646..18389
DNA (744bp) protein (248aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule
hypothetical protein n=1 Tax=Saccharibacter floricola RepID=UPI00035C4F8F
phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
13_1_20cm_2_scaffold_1183_18
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18383..19135
DNA (753bp) protein (251aa)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP
imidazole glycerol phosphate synthase subunit HisF (EC:5.3.1.16)
HisF-LUCA n=1 Tax=synthetic construct RepID=UPI0003C0DDA4
13_1_20cm_2_scaffold_1183_19
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

19132..19755
DNA (624bp) protein (208aa)
Histidine biosynthesis bifunctional protein HisIE n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BHU4_MEISD
Histidine biosynthesis bifunctional protein HisIE {ECO:0000256|HAMAP-Rule:MF_01019}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas meth
phosphoribosyl-ATP diphosphatase
13_1_20cm_2_scaffold_1183_20
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19785..20243)
DNA (459bp) protein (153aa)
ribosomal-protein-alanine acetyltransferase; K03789 ribosomal-protein-alanine N-acetyltransferase [EC:2.3.1.128] Tax=RBG_16_Anaeromyxobacter_69_14_curated
Ribosomal-protein-alanine acetyltransferase n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CQL4_MYXFH
ribosomal-protein-alanine acetyltransferase
13_1_20cm_2_scaffold_1183_21
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20284..20967)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CQL3_MYXFH
Uncharacterized protein {ECO:0000313|EMBL:GAO02629.1}; Flags: Precursor;; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; A
hypothetical protein
13_1_20cm_2_scaffold_1183_22
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21027..22145
DNA (1119bp) protein (373aa)
Chaperone protein DnaJ n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08ZK5_STIAD rbh
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="
dnaJ; chaperone protein DnaJ
13_1_20cm_2_scaffold_1183_23
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22156..22884
DNA (729bp) protein (243aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HD80_ANADF
Uncharacterized protein {ECO:0000313|EMBL:KFA88376.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cy
hypothetical protein
13_1_20cm_2_scaffold_1183_24
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23176..25533
DNA (2358bp) protein (786aa)
ATPase AAA-2 domain protein n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UJX8_ANASK rbh
ATPase AAA-2 domain protein {ECO:0000313|EMBL:ACG72687.1}; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.
ATPase AAA
13_1_20cm_2_scaffold_1183_25
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

25530..26441
DNA (912bp) protein (304aa)
NADP oxidoreductase coenzyme f420-dependent n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L4R9_THERP
NADP oxidoreductase coenzyme f420-dependent {ECO:0000313|EMBL:ACM06462.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobiu
NADP oxidoreductase coenzyme f420-dependent
13_1_20cm_2_scaffold_1183_26
unknown

Not on your lists

comp(26266..26814)
DNA (549bp) protein (183aa)

This feature has no annotations

13_1_20cm_2_scaffold_1183_27
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27049..28980)
DNA (1932bp) protein (644aa)
PBS lyase HEAT domain protein repeat-containing protein n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M5G6_GEODF
HEAT-like repeat-containing protein {ECO:0000313|EMBL:ACM21725.1}; TaxID=316067 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobact
PBS lyase
13_1_20cm_2_scaffold_1183_28
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

comp(28992..30527)
DNA (1536bp) protein (512aa)
hypothetical protein n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI000363A9B3
Uncharacterized protein {ECO:0000313|EMBL:KDA54942.1}; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
hypothetical protein
13_1_20cm_2_scaffold_1183_29
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

comp(30532..31260)
DNA (729bp) protein (243aa)
GAF domain protein n=2 Tax=Geobacter sulfurreducens RepID=D7ALB7_GEOSK
Uncharacterized protein {ECO:0000313|EMBL:KDA54941.1}; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
GAF domain-containing protein
13_1_20cm_2_scaffold_1183_30
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists

comp(31269..31646)
DNA (378bp) protein (126aa)
Response regulator receiver protein n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M5H1_GEODF
response regulator receiver protein Tax=RBG_13_OP8X_37_8_curated
response regulator receiver protein
Displaying items 1-30 of 44 in total

View Taxonomy