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13_1_20cm_2_scaffold_12905

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_12905_1
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2..733)
DNA (732bp) protein (244aa)
Aldo/keto reductase family oxidoreductase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MMV5_CORCM
Aldo/keto reductase family oxidoreductase {ECO:0000313|EMBL:AFE10854.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococ
yeaE; aldo/keto reductase family oxidoreductase
13_1_20cm_2_scaffold_12905_2
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

comp(1449..2468)
DNA (1020bp) protein (340aa)
2-oxoglutarate ferredoxin oxidoreductase subunit beta n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SPR8_9BACT
2-oxoglutarate ferredoxin oxidoreductase subunit beta {ECO:0000313|EMBL:BAL58154.1}; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.
2-oxoglutarate ferredoxin oxidoreductase subunit beta
13_1_20cm_2_scaffold_12905_3
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

comp(2469..3017)
DNA (549bp) protein (183aa)
korA2; 2-oxoglutarate ferredoxin oxidoreductase subunit alpha (EC:1.2.7.3)
2-oxoglutarate ferredoxin oxidoreductase subunit alpha n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SPR9_9BACT
2-oxoglutarate ferredoxin oxidoreductase subunit alpha {ECO:0000313|EMBL:BAL58155.1}; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium
13_1_20cm_2_scaffold_12905_4
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(3014..4219)
DNA (1206bp) protein (402aa)
2-oxoglutarate ferredoxin oxidoreductase alpha subunit {ECO:0000313|EMBL:CBE68679.1}; EC=1.2.7.3 {ECO:0000313|EMBL:CBE68679.1};; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Met
korA; 2-oxoglutarate ferredoxin oxidoreductase subunit alpha (EC:1.2.7.3)
2-oxoglutarate ferredoxin oxidoreductase alpha subunit n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MFZ8_9BACT
13_1_20cm_2_scaffold_12905_5
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4381..5580
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y8V6_SORCE
Uncharacterized protein {ECO:0000313|EMBL:AGP41314.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
hypothetical protein
13_1_20cm_2_scaffold_12905_6
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5584..7041
DNA (1458bp) protein (486aa)
nicotinate phosphoribosyltransferase-like protein; K00763 nicotinate phosphoribosyltransferase [EC:2.4.2.11] Tax=RBG_16_Anaeromyxobacter_69_14_curated
Nicotinate phosphoribosyltransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZ85_9BACT rbh
putative nicotinate phosphoribosyltransferase
13_1_20cm_2_scaffold_12905_7
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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comp(7045..7512)
DNA (468bp) protein (156aa)
Redoxin domain-containing protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GKG3_9BACT
Thiol-disulfide isomerase and thioredoxins Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
redoxin domain-containing protein
13_1_20cm_2_scaffold_12905_8
unknown

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comp(7512..7973)
DNA (462bp) protein (154aa)

This feature has no annotations

13_1_20cm_2_scaffold_12905_9
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8149..9024
DNA (876bp) protein (292aa)
Alpha-L-glutamate ligase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MPV0_CORCM rbh
Alpha-L-glutamate ligase {ECO:0000313|EMBL:AFE10148.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Co
rimK1; alpha-L-glutamate ligase
13_1_20cm_2_scaffold_12905_10
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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9034..9426
DNA (393bp) protein (131aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2II71_ANADE
Uncharacterized protein {ECO:0000313|EMBL:ABC81355.1}; Flags: Precursor;; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; An
hypothetical protein
13_1_20cm_2_scaffold_12905_11
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9423..10172
DNA (750bp) protein (250aa)
RNA methyltransferase, TrmH family, group 3 n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UDU1_ANASK
RNA methyltransferase, TrmH family, group 3 {ECO:0000313|EMBL:ACG73507.1}; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; A
TrmH family RNA methyltransferase
13_1_20cm_2_scaffold_12905_12
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10237..12342)
DNA (2106bp) protein (702aa)
Putative outer membrane receptor signal peptide protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SJL3_METPP rbh
Outer membrane cobalamin translocator {ECO:0000313|EMBL:EWS56929.1}; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
outer membrane receptor signal peptide protein
13_1_20cm_2_scaffold_12905_13
unknown

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comp(12397..12825)
DNA (429bp) protein (143aa)

This feature has no annotations

13_1_20cm_2_scaffold_12905_14
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12966..13706
DNA (741bp) protein (247aa)
MEMO1 family protein CAP2UW1_2625 n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RSK9_ACCPU
hypothetical protein; K06990 Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
hypothetical protein
13_1_20cm_2_scaffold_12905_15
RLO_Omnitrophica_50_11, Omnitrophica, Bacteria

Not on your lists

13708..14772
DNA (1065bp) protein (355aa)
radical SAM protein; K04069 pyruvate formate lyase activating enzyme [EC:1.97.1.4] Tax=RIFCSPLOWO2_12_FULL_Omnitrophica_50_11_curated
Radical SAM domain protein n=1 Tax=Thiocapsa marina 5811 RepID=F9UGW9_9GAMM
pyruvate-formate lyase-activating enzyme
13_1_20cm_2_scaffold_12905_trna_1
unknown

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14887..14959
DNA (73bp)
transferRNA
13_1_20cm_2_scaffold_12905_trna_2
unknown

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15021..15103
DNA (83bp)
transferRNA
13_1_20cm_2_scaffold_12905_trna_3
unknown

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15130..15202
DNA (73bp)
transferRNA
13_1_20cm_2_scaffold_12905_trna_4
unknown

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15223..15295
DNA (73bp)
transferRNA
13_1_20cm_2_scaffold_12905_16
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


15315..15467
DNA (153bp) protein (51aa)
50S ribosomal protein L33 n=3 Tax=Anaeromyxobacter RepID=RL33_ANAD2
50S ribosomal protein L33 {ECO:0000255|HAMAP-Rule:MF_00294}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacte
rpmG; 50S ribosomal protein L33
13_1_20cm_2_scaffold_12905_trna_5
unknown

Not on your lists

15479..15551
DNA (73bp)
transferRNA
13_1_20cm_2_scaffold_12905_17
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15572..15907
DNA (336bp) protein (112aa)
Protein translocase subunit SecE n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HCI3_ANADF
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromy
preprotein translocase subunit SecE
13_1_20cm_2_scaffold_12905_18
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15921..16397
DNA (477bp) protein (159aa)
Transcription termination/antitermination protein NusG n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2II83_ANADE
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcal
transcription antitermination protein nusG
13_1_20cm_2_scaffold_12905_19
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


16442..16891
DNA (450bp) protein (150aa)
50S ribosomal protein L11 n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=RL11_ANADF
50S ribosomal protein L11 {ECO:0000255|HAMAP-Rule:MF_00736}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacte
rplK; 50S ribosomal protein L11
13_1_20cm_2_scaffold_12905_20
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


16894..17421
DNA (528bp) protein (176aa)
50S ribosomal protein L1 n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HQJ9_9FIRM
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=401526 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Thermosinus.;" source="Thermosinus carboxydivor
rplA; 50S ribosomal protein L1
13_1_20cm_2_scaffold_12905_21
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


17418..17558
DNA (141bp) protein (47aa)
50S ribosomal protein L1 n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MNP0_CORCM
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source
Suspect SCG annotation. See neighboring gene [13_1_20cm_2_scaffold_12905_20].
rplA; 50S ribosomal protein L1
13_1_20cm_2_scaffold_12905_22
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


17820..18338
DNA (519bp) protein (173aa)
50S ribosomal protein L10 n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=RL10_ANASK
50S ribosomal protein L10 {ECO:0000255|HAMAP-Rule:MF_00362}; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacte
rplJ; 50S ribosomal protein L10
13_1_20cm_2_scaffold_12905_23
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


18421..18810
DNA (390bp) protein (130aa)
50S ribosomal protein L7/L12 n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QHD9_9DELT
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" s
LSU ribosomal protein L12P (L7/L12)
13_1_20cm_2_scaffold_12905_24
unknown

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18947..19018
DNA (72bp) protein (24aa)

This feature has no annotations

Displaying 29 items

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