ggKbase home page

13_1_20cm_2_scaffold_143

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_143_1
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..210
DNA (210bp) protein (70aa)
Response regulator of zinc sigma-54-dependent two-component system n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2U4B2_9DELT
Response regulator of zinc sigma-54-dependent two-component system {ECO:0000313|EMBL:AKF09361.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sanda
two component sigma54 specific Fis family transcriptional regulator
13_1_20cm_2_scaffold_143_2
unknown

Not on your lists

470..559
DNA (90bp) protein (30aa)

This feature has no annotations

13_1_20cm_2_scaffold_143_3
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

559..2283
DNA (1725bp) protein (575aa)
Potassium-transporting ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00275};; ATP phosphohydrolase [potassium-transporting] A chain {ECO:0000256|HAMAP-Rule:M
kdpA; potassium-transporting ATPase subunit A (EC:3.6.3.12)
Potassium-transporting ATPase A chain n=2 Tax=Myxococcus xanthus RepID=Q1DFX6_MYXXD rbh
13_1_20cm_2_scaffold_143_4
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2284..4359
DNA (2076bp) protein (692aa)
Potassium-transporting ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00285};; ATP phosphohydrolase [potassium-transporting] B chain {ECO:0000256|HAMAP-Rule:M
Potassium-transporting ATPase B chain n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MWC0_CORCM rbh
kdpB; K+-transporting ATPase subunit B
13_1_20cm_2_scaffold_143_5
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4369..4971
DNA (603bp) protein (201aa)
Potassium-transporting ATPase C chain n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MWB9_CORCM
K+-transporting ATPase subunit C Tax=RBG_16_Anaeromyxobacter_69_14_curated
kdpC; K+-transporting ATPase subunit C
13_1_20cm_2_scaffold_143_6
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5028..6170
DNA (1143bp) protein (381aa)
Osmosensitive K+ channel histidine kinase KdpD protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2SJ71_9DELT rbh
Osmosensitive K+ channel histidine kinase KdpD {ECO:0000313|EMBL:KFE68395.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hya
osmosensitive K+ channel histidine kinase sensor subunit
13_1_20cm_2_scaffold_143_7
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6167..7999
DNA (1833bp) protein (611aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cys
Sensory box histidine kinase n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U0X7_MYXSD rbh
sensory box histidine kinase
13_1_20cm_2_scaffold_143_8
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8115..9482)
DNA (1368bp) protein (456aa)
Sigma-54 dependent DNA-binding response regulator n=2 Tax=Myxococcus xanthus RepID=Q1DFW8_MYXXD rbh
sigma-54 dependent DNA-binding response regulator; K11384 two-component system, NtrC family, response regulator AlgB Tax=RBG_16_Anaeromyxobacter_69_14_curated
Fis family transcriptional regulator
13_1_20cm_2_scaffold_143_9
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9683..11824
DNA (2142bp) protein (714aa)
Amino acid transporter-like protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JEH0_ANAD2 rbh
Amino acid transporter-like protein {ECO:0000313|EMBL:ACL64296.1}; TaxID=455488 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyx
amino acid transporter-like protein
13_1_20cm_2_scaffold_143_10
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11896..12360
DNA (465bp) protein (155aa)
Enoyl-CoA hydratase (EC:4.2.1.17)
Acyl dehydratase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9Q316_9DELT
Dehydratase {ECO:0000313|EMBL:KFA91475.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter vi
13_1_20cm_2_scaffold_143_11
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12379..13725
DNA (1347bp) protein (449aa)
N-succinylarginine dihydrolase {ECO:0000256|HAMAP-Rule:MF_01172, ECO:0000256|SAAS:SAAS00074425}; EC=3.5.3.23 {ECO:0000256|HAMAP-Rule:MF_01172, ECO:0000256|SAAS:SAAS00074418};; TaxID=1144275 species="B
N-succinylarginine dihydrolase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MLL1_CORCM rbh
astB; succinylarginine dihydrolase
13_1_20cm_2_scaffold_143_12
unknown

Not on your lists

comp(13823..14731)
DNA (909bp) protein (303aa)

This feature has no annotations

13_1_20cm_2_scaffold_143_13
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

14848..16353
DNA (1506bp) protein (502aa)
Glr0176 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NP81_GLOVI
Glr0176 protein {ECO:0000313|EMBL:BAC88117.1}; TaxID=251221 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
hypothetical protein
13_1_20cm_2_scaffold_143_14
unknown

Not on your lists

comp(16478..16828)
DNA (351bp) protein (117aa)

This feature has no annotations

13_1_20cm_2_scaffold_143_15
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16910..17860
DNA (951bp) protein (317aa)
signal peptide peptidase SppA, 36K type (EC:3.1.3.2); K04773 protease IV [EC:3.4.21.-] Tax=RBG_16_Anaeromyxobacter_69_14_curated
Signal peptide peptidase SppA, 36K type n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HCP7_ANADF
signal peptide peptidase SppA, 36K type
13_1_20cm_2_scaffold_143_16
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17860..18366
DNA (507bp) protein (169aa)
Histidine triad (HIT) protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HCP6_ANADF
Histidine triad (HIT) protein {ECO:0000313|EMBL:ABS26492.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacte
histidine triad (HIT) protein
13_1_20cm_2_scaffold_143_17
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


18360..20129
DNA (1770bp) protein (590aa)
Arginine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000255|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00123}; Short=ArgRS {ECO:0000255|HAMAP-Rule:
Arginine--tRNA ligase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=SYR_ANADF rbh
argS; arginyl-tRNA synthetase
13_1_20cm_2_scaffold_143_18
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20182..20826
DNA (645bp) protein (215aa)
Sporulation domain protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HCP3_ANADF
Sporulation domain protein {ECO:0000313|EMBL:ABS26489.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;
sporulation domain-containing protein
13_1_20cm_2_scaffold_143_19
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20829..21188
DNA (360bp) protein (120aa)
Mannose-1-phosphate guanylyltransferase protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2RWX9_9DELT
cupin Tax=RBG_16_Anaeromyxobacter_69_14_curated
cupin domain-containing protein
13_1_20cm_2_scaffold_143_20
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21188..22126
DNA (939bp) protein (313aa)
NAD-dependent epimerase/dehydratase family protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FMN2_STIAD rbh
NAD-dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:ADO71813.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae;
NAD-dependent epimerase/dehydratase family protein
13_1_20cm_2_scaffold_143_21
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22193..23944
DNA (1752bp) protein (584aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP
Elongation factor 4 n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=LEPA_ANADE rbh
GTP-binding protein LepA
13_1_20cm_2_scaffold_143_22
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23941..25113
DNA (1173bp) protein (391aa)
Signal peptidase I {ECO:0000256|RuleBase:RU003993}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU003993};; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae;
lepB; signal peptidase i (EC:3.4.21.89)
Signal peptidase I n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FMN5_STIAD
13_1_20cm_2_scaffold_143_23
unknown

Not on your lists

25156..25584
DNA (429bp) protein (143aa)

This feature has no annotations

13_1_20cm_2_scaffold_143_24
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25657..27822)
DNA (2166bp) protein (722aa)
Pyrrolo-quinoline quinone n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HCD3_ANADF
Pyrrolo-quinoline quinone {ECO:0000313|EMBL:ABS26379.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;"
Pyrrolo-quinoline quinone
13_1_20cm_2_scaffold_143_25
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27941..29641
DNA (1701bp) protein (567aa)
Uncharacterized protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JAD2_ANAD2 rbh
Uncharacterized protein {ECO:0000313|EMBL:ACL65651.1}; TaxID=455488 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" s
hypothetical protein
13_1_20cm_2_scaffold_143_26
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29686..30627
DNA (942bp) protein (314aa)
PBS lyase HEAT domain protein repeat-containing protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HCD1_ANADF
PBS lyase HEAT domain protein repeat-containing protein {ECO:0000313|EMBL:ABS26377.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxoba
HEAT repeat-containing PBS lyase
13_1_20cm_2_scaffold_143_27
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30624..31178
DNA (555bp) protein (185aa)
Conserved uncharacterized protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FYR9_STIAD
hypothetical protein Tax=RBG_16_Anaeromyxobacter_69_14_curated
hypothetical protein
13_1_20cm_2_scaffold_143_28
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31192..31638
DNA (447bp) protein (149aa)
thioesterase superfamily protein; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-] Tax=RBG_16_Anaeromyxobacter_69_14_curated
4-hydroxybenzoyl-CoA thioesterase n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7TDK6_DESML
thioesterase family protein
13_1_20cm_2_scaffold_143_29
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31631..32593
DNA (963bp) protein (321aa)
glpX; fructose-1,6-bisphosphatase, class II (EC:3.1.3.11); K02446 fructose-1,6-bisphosphatase II [EC:3.1.3.11] Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
glpX; fructose-1,6-bisphosphatase, class II (EC:3.1.3.11)
Fructose-1,6-bisphosphatase n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FCU1_STIAD rbh
13_1_20cm_2_scaffold_143_30
GWA2_Deltaproteobacteria_45_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32757..33221
DNA (465bp) protein (155aa)
Putative oligoketide cyclase/dehydratase or lipid transport protein YfjG n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2STZ4_9DELT
putative cyclase/dehydrase Tax=GWA2_Deltaproteobacteria_45_12_curated
cyclase/dehydrase
Displaying items 1-30 of 36 in total

View Taxonomy