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13_1_20cm_2_scaffold_1568

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_1568_trna_1
unknown

Not on your lists

comp(7..88)
DNA (82bp)
transferRNA
13_1_20cm_2_scaffold_1568_1
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(135..563)
DNA (429bp) protein (143aa)
Protein translocase subunit secG n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2II23_ANADE
protein translocase subunit secG; K03075 preprotein translocase subunit SecG Tax=RBG_16_Anaeromyxobacter_69_14_curated
protein translocase subunit secG
13_1_20cm_2_scaffold_1568_2
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

Not on your lists

663..1391
DNA (729bp) protein (243aa)
hypothetical protein Tax=RBG_16_Chloroflexi_54_18_curated
hypothetical protein alias=RBG9_36_27,RBG9_C00036G00027 id=1245629 tax=RBG9 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi
carbohydrate kinase
13_1_20cm_2_scaffold_1568_3
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1458..2147)
DNA (690bp) protein (230aa)
DNA-binding response regulator, LuxR family n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2U3K9_9DELT
DNA-binding response regulator, LuxR family {ECO:0000313|EMBL:ERK92554.1}; TaxID=1297742 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococc
LuxR family transcriptional regulator
13_1_20cm_2_scaffold_1568_4
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2144..3457)
DNA (1314bp) protein (438aa)
Sensor histidine kinase n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FX67_STIAD rbh
Sensor histidine kinase {ECO:0000313|EMBL:ADO72306.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Sti
sensor histidine kinase
13_1_20cm_2_scaffold_1568_5
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3497..3760)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2S9P4_9DELT
Uncharacterized protein {ECO:0000313|EMBL:AKF81466.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxoco
hypothetical protein
13_1_20cm_2_scaffold_1568_6
unknown

Not on your lists

3798..4439
DNA (642bp) protein (214aa)

This feature has no annotations

13_1_20cm_2_scaffold_1568_7
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4436..5107
DNA (672bp) protein (224aa)
UBA/THIF-type NAD/FAD binding protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HCN1_ANADF
UBA/THIF-type NAD/FAD binding protein Tax=RBG_16_Anaeromyxobacter_69_14_curated
UBA/THIF-type NAD/FAD binding protein
13_1_20cm_2_scaffold_1568_8
Hydrogenivirga sp. 128-5-R1-1, Hydrogenivirga, Aquificales, Aquificae, Aquificae, Bacteria

Not on your lists

5098..5379
DNA (282bp) protein (94aa)
MoaD family protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8USB7_9AQUI
MoaD family protein {ECO:0000313|EMBL:EDP76072.1}; TaxID=392423 species="Bacteria; Aquificae; Aquificales; Aquificaceae; Hydrogenivirga.;" source="Hydrogenivirga sp. 128-5-R1-1.;"
MoaD family protein
13_1_20cm_2_scaffold_1568_9
unknown

Not on your lists

5373..5702
DNA (330bp) protein (110aa)

This feature has no annotations

13_1_20cm_2_scaffold_1568_10
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5699..6586
DNA (888bp) protein (296aa)
Pyridoxal-5'-phosphate-dependent protein beta subunit n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HGE4_ANADF rbh
Pyridoxal-5'-phosphate-dependent protein beta subunit {ECO:0000313|EMBL:ABS27790.1}; Flags: Precursor;; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterin
pyridoxal-5'-phosphate-dependent protein beta subunit
13_1_20cm_2_scaffold_1568_11
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

6583..7047
DNA (465bp) protein (155aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IF99_ANADE
Mov34/MPN/PAD-1 family protein Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
hypothetical protein
13_1_20cm_2_scaffold_1568_12
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7146..7910
DNA (765bp) protein (255aa)
Adenylyl-sulfate kinase {ECO:0000256|RuleBase:RU004347, ECO:0000256|SAAS:SAAS00249903}; EC=2.7.1.25 {ECO:0000256|RuleBase:RU004347, ECO:0000256|SAAS:SAAS00249903};; TaxID=1406225 species="Bacteria; Pr
Adenylyl-sulfate kinase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9P444_9DELT
adenylylsulfate kinase
13_1_20cm_2_scaffold_1568_13
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7913..8575)
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MNR2_CORCM
Uncharacterized protein {ECO:0000313|EMBL:AFE06797.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Cor
hypothetical protein
13_1_20cm_2_scaffold_1568_14
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8682..9503
DNA (822bp) protein (274aa)
GMP synthase [glutamine-hydrolyzing] protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2UBM1_9DELT rbh
GMP synthase [glutamine-hydrolyzing] protein {ECO:0000313|EMBL:ERK92563.1}; TaxID=1297742 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococ
hypothetical protein
13_1_20cm_2_scaffold_1568_15
RBG_16_Aminicenantes_66_30_curated, Aminicenantes, Bacteria

Not on your lists

comp(9521..10210)
DNA (690bp) protein (230aa)
tRNA pseudouridine synthase A; K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] Tax=RBG_16_Aminicenantes_66_30_curated
tRNA pseudouridine synthase A (EC:5.4.99.12)
tRNA pseudouridine synthase A n=1 Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A8ZTL2_DESOH
13_1_20cm_2_scaffold_1568_16
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10544..11836
DNA (1293bp) protein (431aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2II36_ANADE rbh
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales;
clpX; ATP-dependent protease ATP-binding subunit ClpX
13_1_20cm_2_scaffold_1568_17
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12066..13232
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JBB7_ANAD2
hypothetical protein Tax=RBG_16_Anaeromyxobacter_69_14_curated
hypothetical protein
13_1_20cm_2_scaffold_1568_18
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13249..14205
DNA (957bp) protein (319aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IKK8_ANADE
hypothetical protein; K07027 Tax=RBG_16_Anaeromyxobacter_69_14_curated
hypothetical protein
13_1_20cm_2_scaffold_1568_19
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14202..15206)
DNA (1005bp) protein (335aa)
membrane dipeptidase (EC:3.4.13.19)
Membrane dipeptidase n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LSQ3_HALO1
peptidase Tax=RBG_13_Deltaproteobacteria_61_14_curated
13_1_20cm_2_scaffold_1568_20
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15206..16240)
DNA (1035bp) protein (345aa)
Chaperone protein DnaK n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2SV27_9DELT
Chaperone protein DnaK {ECO:0000313|EMBL:KFE70656.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyala
chaperone protein DnaK
13_1_20cm_2_scaffold_1568_21
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16665..17189
DNA (525bp) protein (175aa)
Putative serine protein kinase, PrkA n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JBB5_ANAD2
Serine protease {ECO:0000313|EMBL:AKF81485.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus ful
serine protein kinase PrkA
13_1_20cm_2_scaffold_1568_22
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17129..18829
DNA (1701bp) protein (567aa)
Uncharacterized protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U8D6_MYXSD rbh
Putative serine protein kinase, PrkA {ECO:0000313|EMBL:KFE70653.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;"
hypothetical protein
13_1_20cm_2_scaffold_1568_23
unknown

Not on your lists

comp(18817..19887)
DNA (1071bp) protein (357aa)

This feature has no annotations

13_1_20cm_2_scaffold_1568_24
R_OP3X_63_14, OP3X, Bacteria

Not on your lists

comp(19918..20544)
DNA (627bp) protein (209aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9NZY2_9DELT
two-component response regulator Tax=RIFCSPHIGHO2_02_FULL_OP3X_63_14_curated
LuxR family transcriptional regulator
13_1_20cm_2_scaffold_1568_25
Paracoccus denitrificans, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20563..21486)
DNA (924bp) protein (308aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=318586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae;
Histidine kinase n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B138_PARDP
histidine kinase
13_1_20cm_2_scaffold_1568_26
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21598..22401
DNA (804bp) protein (268aa)
Peptidase S1 and S6, chymotrypsin/Hap n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2II41_ANADE
peptidase S1 and S6, chymotrypsin/Hap Tax=RBG_16_Anaeromyxobacter_69_14_curated
peptidase S1 and S6, chymotrypsin/Hap
13_1_20cm_2_scaffold_1568_27
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22435..22896
DNA (462bp) protein (154aa)
zinc-binding CMP/dCMP deaminase; K01493 dCMP deaminase [EC:3.5.4.12] Tax=RBG_16_Anaeromyxobacter_69_14_curated
CMP/dCMP deaminase zinc-binding n=3 Tax=Anaeromyxobacter RepID=B4UEG9_ANASK
zinc-binding CMP/dCMP deaminase
13_1_20cm_2_scaffold_1568_28
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22972..23955
DNA (984bp) protein (328aa)
Peptidase C14, caspase catalytic subunit p20 n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q212G2_RHOPB
Peptidase C14, caspase catalytic subunit p20 {ECO:0000313|EMBL:ABD88724.1}; Flags: Precursor;; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhod
peptidase C14, caspase catalytic subunit p20
Displaying 29 items

View Taxonomy