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13_1_20cm_2_scaffold_2538

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_2538_1
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2..724)
DNA (723bp) protein (241aa)
Twitching motility protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JCY6_ANAD2
Twitching motility protein {ECO:0000313|EMBL:ACL64014.1}; TaxID=455488 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;
twitching motility protein
13_1_20cm_2_scaffold_2538_2
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(767..2476)
DNA (1710bp) protein (570aa)
Type II secretion system protein E n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2INM0_ANADE rbh
Type IV pilus assembly protein TapB {ECO:0000313|EMBL:GAO02290.1}; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromy
type II secretion system protein E
13_1_20cm_2_scaffold_2538_3
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2589..3554)
DNA (966bp) protein (322aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=1297742 species="Bacteria; Proteobacte
Riboflavin kinase protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2SPJ9_9DELT rbh
ribF; riboflavin biosynthesis protein RibF
13_1_20cm_2_scaffold_2538_4
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3551..4036)
DNA (486bp) protein (162aa)
Cytidine deaminase n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UCR9_ANASK
Cytidine deaminase {ECO:0000313|EMBL:ACG71893.1}; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source
cytidine deaminase
13_1_20cm_2_scaffold_2538_5
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4033..4896)
DNA (864bp) protein (288aa)
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; TaxID=394096 species="Bac
Purine nucleoside phosphorylase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H830_ANADF
inosine guanosine and xanthosine phosphorylase family protein
13_1_20cm_2_scaffold_2538_6
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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4958..5668
DNA (711bp) protein (237aa)
MotA/TolQ/ExbB proton channel n=2 Tax=Anaeromyxobacter RepID=B4UHB1_ANASK
MotA/TolQ/ExbB proton channel {ECO:0000313|EMBL:ACG75353.1}; Flags: Precursor;; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacterace
MotA/TolQ/ExbB proton channel
13_1_20cm_2_scaffold_2538_7
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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5669..6124
DNA (456bp) protein (152aa)
Biopolymer transport protein ExbD/TolR n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H7B4_ANADF
Biopolymer transporter ExbD {ECO:0000313|EMBL:KFA94702.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source
biopolymer transport protein ExbD/TolR
13_1_20cm_2_scaffold_2538_8
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6129..7226)
DNA (1098bp) protein (366aa)
Teichoic acid biosynthesis related protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IMH3_ANADE
Teichoic acid biosynthesis related protein {ECO:0000313|EMBL:ABC80009.1}; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; An
teichoic acid biosynthesis-like protein
13_1_20cm_2_scaffold_2538_9
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7240..8541)
DNA (1302bp) protein (434aa)
Pyrimidine-nucleoside phosphorylase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H829_ANADF rbh
Pyrimidine-nucleoside phosphorylase {ECO:0000313|EMBL:ABS24875.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyx
pyrimidine-nucleoside phosphorylase
13_1_20cm_2_scaffold_2538_10
Streptomyces sp. SPB78, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9420..10040)
DNA (621bp) protein (207aa)
Diaminopimelate decarboxylase n=1 Tax=Streptomyces sp. SPB78 RepID=D9UT71_9ACTO
Diaminopimelate decarboxylase {ECO:0000313|EMBL:EFK98408.1}; TaxID=591157 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. (strain SPB78
13_1_20cm_2_scaffold_2538_11
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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10062..10673
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JEZ5_ANAD2
Thioredoxin-related protein {ECO:0000313|EMBL:EXI85890.1}; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93
hypothetical protein
13_1_20cm_2_scaffold_2538_12
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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11018..12130
DNA (1113bp) protein (371aa)
ABC transporter n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PEF9_9DELT
ABC transporter {ECO:0000313|EMBL:EPX60732.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacte
sugar ABC transporter substrate-binding protein
13_1_20cm_2_scaffold_2538_13
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12127..13644
DNA (1518bp) protein (506aa)
Ribose ABC transport system, ATP-binding protein RbsA n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PKZ2_9DELT rbh
Ribose ABC transport system, ATP-binding protein RbsA {ECO:0000313|EMBL:EPX63112.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacterac
ABC transporter ATP-binding protein
13_1_20cm_2_scaffold_2538_14
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13637..14737
DNA (1101bp) protein (367aa)
ABC transporter permease n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CNA1_MYXFH rbh
ABC transporter permease {ECO:0000313|EMBL:AEI69085.1}; TaxID=483219 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxoco
ABC transporter permease
13_1_20cm_2_scaffold_2538_15
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15170..15541
DNA (372bp) protein (124aa)
ABC transporter permease n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UHS8_MYXSD
ABC transporter permease {ECO:0000313|EMBL:KFA93971.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="C
ABC transporter permease
13_1_20cm_2_scaffold_2538_16
GWA2_Ignavibacteriae_55_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(15594..16073)
DNA (480bp) protein (160aa)
Putative thioesterase; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-] Tax=GWA2_Ignavibacteriae_55_25_curated
hypothetical protein; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-] alias=RBG9_10_42,RBG9_C00010G00042 id=1244783 tax=RBG9 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi
TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family
13_1_20cm_2_scaffold_2538_17
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16073..17239)
DNA (1167bp) protein (389aa)
Phosphopentomutase {ECO:0000255|HAMAP-Rule:MF_00740}; EC=5.4.2.7 {ECO:0000255|HAMAP-Rule:MF_00740};; Phosphodeoxyribomutase {ECO:0000255|HAMAP-Rule:MF_00740}; TaxID=455488 species="Bacteria; Proteobac
phosphopentomutase (EC:5.4.2.7)
Phosphopentomutase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=DEOB_ANAD2 rbh
13_1_20cm_2_scaffold_2538_18
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17301..17972)
DNA (672bp) protein (224aa)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114};; 2-deoxy-D-ribose 5-phosphate aldolase {E
deoC; deoxyribose-phosphate aldolase (EC:4.1.2.4)
Deoxyribose-phosphate aldolase n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q098Q4_STIAD
13_1_20cm_2_scaffold_2538_19
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18003..19028
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CAB8_MYXFH rbh
Uncharacterized protein {ECO:0000313|EMBL:AEI64575.1}; TaxID=483219 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococ
hypothetical protein
13_1_20cm_2_scaffold_2538_20
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(18997..19830)
DNA (834bp) protein (278aa)
coproporphyrinogen oxidase (EC:1.3.3.3)
coproporphyrinogen III oxidase n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI0002624D7D
Oxygen-dependent coproporphyrinogen-III oxidase {ECO:0000256|HAMAP-Rule:MF_00333}; Short=CPO {ECO:0000256|HAMAP-Rule:MF_00333};; Short=Coprogen oxidase {ECO:0000256|HAMAP-Rule:MF_00333};; Short=Coprop
13_1_20cm_2_scaffold_2538_21
Desulfotomaculum carboxydivorans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19841..20506)
DNA (666bp) protein (222aa)
Elongation factor Ts n=2 Tax=Desulfotomaculum RepID=F6B6J4_DESCC
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=868595 species="Bacteria; Firmicutes; Clostridia; Clostridi
elongation factor Ts
13_1_20cm_2_scaffold_2538_22
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(20513..21553)
DNA (1041bp) protein (347aa)
30S ribosomal protein S2 n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08SK6_STIAD rbh
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source=
rpsB; 30S ribosomal protein S2
13_1_20cm_2_scaffold_2538_23
unknown

Not on your lists

22186..22392
DNA (207bp) protein (69aa)

This feature has no annotations

13_1_20cm_2_scaffold_2538_24
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

22551..23441
DNA (891bp) protein (297aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI000373F3C0
Uncharacterized protein {ECO:0000313|EMBL:AHG92371.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Protein of unknown function DUF2339, transmembrane
Displaying 24 items

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