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13_1_20cm_2_scaffold_512

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_512_1
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3..764)
DNA (762bp) protein (254aa)
Type II and III secretion system protein, secretin n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2INN8_ANADE
Type II and III secretion system protein, secretin {ECO:0000313|EMBL:ABC80421.1}; Flags: Precursor;; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae
type II and III secretion system protein, secretin
13_1_20cm_2_scaffold_512_2
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(794..1375)
DNA (582bp) protein (194aa)
PilP n=2 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08Z01_STIAD
PilP {ECO:0000313|EMBL:EAU65703.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca
pilP; PilP protein
13_1_20cm_2_scaffold_512_3
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1372..1977)
DNA (606bp) protein (202aa)
Type IV pilus biogenesis protein PilO n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MQ41_CORCM
Type IV pilus biogenesis protein PilO {ECO:0000313|EMBL:KFE63615.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;
pilO; type IV pilus biogenesis protein PilO
13_1_20cm_2_scaffold_512_4
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1987..2523)
DNA (537bp) protein (179aa)
Fimbrial assembly family protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H854_ANADF
fimbrial assembly; K02663 type IV pilus assembly protein PilN Tax=RBG_16_Anaeromyxobacter_69_14_curated
fimbrial assembly family protein
13_1_20cm_2_scaffold_512_5
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2537..3046)
DNA (510bp) protein (170aa)
Type IV pilus assembly protein PilM n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MQ43_CORCM
Type IV pilus assembly protein PilM {ECO:0000313|EMBL:AGC47635.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" so
type IV pilus assembly protein PilM
13_1_20cm_2_scaffold_512_6
unknown

Not on your lists

3199..3468
DNA (270bp) protein (90aa)

This feature has no annotations

13_1_20cm_2_scaffold_512_7
R_Deltaproteobacteria_44_53, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3637..3864)
DNA (228bp) protein (76aa)
Helix-turn-helix domain protein n=1 Tax=Geobacter sp. (strain M18) RepID=E8WQE5_GEOS8
XRE family transcriptional regulator Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_44_53_curated
helix-turn-helix domain-containing protein
13_1_20cm_2_scaffold_512_8
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4137..5495)
DNA (1359bp) protein (453aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H851_ANADF rbh
two component sigma54 specific Fis family transcriptional regulator; K07714 two-component system, NtrC family, response regulator AtoC Tax=RBG_16_Anaeromyxobacter_69_14_curated
two component sigma54 specific Fis family transcriptional regulator
13_1_20cm_2_scaffold_512_9
RBG_13_Planctomycetes_62_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

5591..7090
DNA (1500bp) protein (500aa)
Amine oxidase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5J4_9BACT rbh
amine oxidase Tax=RBG_13_Planctomycetes_62_9_curated
amine oxidase
13_1_20cm_2_scaffold_512_10
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7096..8226
DNA (1131bp) protein (377aa)
Predicted protein n=1 Tax=Streptomyces sp. AA4 RepID=D9VD34_9ACTO
Predicted protein {ECO:0000313|EMBL:EFL07824.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
group 1 glycosyl transferase
13_1_20cm_2_scaffold_512_11
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8223..9140
DNA (918bp) protein (306aa)
glycosyl transferase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B56573
Uncharacterized protein {ECO:0000313|EMBL:KFN42384.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryzite
glycosyltransferase
13_1_20cm_2_scaffold_512_12
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9137..9871
DNA (735bp) protein (245aa)
Methyltransferase type 11 n=1 Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FU96_METHJ
type 11 methyltransferase Tax=RBG_16_Gamma2_65_34_curated
methyltransferase type 11
13_1_20cm_2_scaffold_512_13
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9875..10546
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Roseobacter sp. CCS2 RepID=A4EG80_9RHOB
methylase
Tax=BJP_IG2069_Desfulfarculales_53_13
13_1_20cm_2_scaffold_512_14
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10615..12345)
DNA (1731bp) protein (577aa)
hypothetical protein n=1 Tax=Pseudomonas pyrrocinia RepID=UPI00030C0027
Uncharacterized protein {ECO:0000313|EMBL:EXI87571.1}; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;"
hypothetical protein
13_1_20cm_2_scaffold_512_15
unknown

Not on your lists

12402..13928
DNA (1527bp) protein (509aa)

This feature has no annotations

13_1_20cm_2_scaffold_512_16
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13900..15219)
DNA (1320bp) protein (440aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cy
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H850_ANADF
integral membrane sensor signal transduction histidine kinase
13_1_20cm_2_scaffold_512_17
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15216..16073)
DNA (858bp) protein (286aa)
Type 4 prepilin-like proteins leader peptide-processing enzyme {ECO:0000256|RuleBase:RU003794}; EC=2.1.1.- {ECO:0000256|RuleBase:RU003794};; EC=3.4.23.43 {ECO:0000256|RuleBase:RU003794};; TaxID=455488
Type 4 prepilin-like proteins leader peptide-processing enzyme n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JD00_ANAD2
peptidase A24A domain-containing protein
13_1_20cm_2_scaffold_512_18
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16088..17026)
DNA (939bp) protein (313aa)
ABC transporter, ATPase subunit n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2INN1_ANADE
ABC transporter, ATPase subunit {ECO:0000313|EMBL:ABC80412.1}; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobac
ABC transporter ATPase
13_1_20cm_2_scaffold_512_19
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

17106..19031
DNA (1926bp) protein (642aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HBD5_ANADF
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_20cm_2_scaffold_512_20
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

19055..19375
DNA (321bp) protein (107aa)
Uncharacterized protein n=2 Tax=Rhodothermus marinus RepID=D0MF21_RHOM4 alias=16ft_combo_ws3_scaffold_1154_30 id=5223388 tax=16ft_combo_ws3 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes
hypothetical protein Tax=RBG_16_Acidobacteria_70_10_curated
Bacterial membrane protein YfhO
13_1_20cm_2_scaffold_512_21
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19658..20032
DNA (375bp) protein (125aa)
Uncharacterized protein {ECO:0000313|EMBL:KFA91608.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cy
13_1_20cm_2_scaffold_512_22
unknown

Not on your lists

20127..20255
DNA (129bp) protein (43aa)

This feature has no annotations

Displaying 22 items

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