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13_1_20cm_2_scaffold_5722

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_5722_1
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1070)
DNA (1068bp) protein (356aa)
Deoxyhypusine synthase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QQ12_9DELT rbh
Deoxyhypusine synthase {ECO:0000313|EMBL:KFA89263.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cys
deoxyhypusine synthase
13_1_20cm_2_scaffold_5722_2
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1106..1822
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L9YS37_NATP1
Uncharacterized protein {ECO:0000313|EMBL:EYF06872.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondrom
hypothetical protein
13_1_20cm_2_scaffold_5722_3
unknown

Not on your lists

comp(1802..2065)
DNA (264bp) protein (88aa)

This feature has no annotations

13_1_20cm_2_scaffold_5722_4
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2114..2620
DNA (507bp) protein (169aa)
Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EX89_9BACT
Appr-1-p processing protein Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1
13_1_20cm_2_scaffold_5722_5
unknown

Not on your lists

comp(2630..3145)
DNA (516bp) protein (172aa)

This feature has no annotations

13_1_20cm_2_scaffold_5722_6
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3142..3681)
DNA (540bp) protein (180aa)
UPF0301 protein MYSTI_02318 n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UAZ5_MYXSD
UPF0301 protein STAUR_2841 {ECO:0000256|HAMAP-Rule:MF_00758}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" sour
hypothetical protein
13_1_20cm_2_scaffold_5722_7
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3685..4023)
DNA (339bp) protein (113aa)
Ferrodoxin, 4Fe-4S n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1D7W4_MYXXD
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; K05524 ferredoxin Tax=RBG_16_Anaeromyxobacter_69_14_curated
ferrodoxin, 4Fe-4S
13_1_20cm_2_scaffold_5722_8
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4215..4934
DNA (720bp) protein (240aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cy
Adenine-specific methyltransferase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QPK5_9DELT rbh
yhdJ; modification methylase
13_1_20cm_2_scaffold_5722_9
unknown

Not on your lists

4889..5395
DNA (507bp) protein (169aa)

This feature has no annotations

13_1_20cm_2_scaffold_5722_10
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5402..6046)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LXH3_HALO1
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
hypothetical protein
13_1_20cm_2_scaffold_5722_11
beta proteobacterium CB, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6080..6829
DNA (750bp) protein (250aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=543913 species="Bacteria; Proteobacteria; Betaproteobacteria.;"
Carbamoyl-phosphate synthase large chain n=1 Tax=beta proteobacterium CB RepID=M1SMR4_9PROT
carB; carbamoyl phosphate synthase large subunit
13_1_20cm_2_scaffold_5722_12
unknown

Not on your lists

comp(7125..7418)
DNA (294bp) protein (98aa)

This feature has no annotations

13_1_20cm_2_scaffold_5722_13
RBG_19FT_COMBO_Planctomycetes_48_8_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(7863..8210)
DNA (348bp) protein (116aa)
hypothetical protein Tax=RBG_19FT_COMBO_Planctomycetes_48_8_curated
13_1_20cm_2_scaffold_5722_14
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8794..9198
DNA (405bp) protein (135aa)
Carbamoyl-phosphate synthase large chain n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HC29_ANADF
Carbamoyl-phosphate synthase large chain {ECO:0000313|EMBL:AKF07052.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;
carB; carbamoyl phosphate synthase large subunit
13_1_20cm_2_scaffold_5722_15
unknown

Not on your lists

9252..9557
DNA (306bp) protein (102aa)

This feature has no annotations

13_1_20cm_2_scaffold_5722_16
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9672..10568)
DNA (897bp) protein (299aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:00002
ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M373_GEODF
13_1_20cm_2_scaffold_5722_17
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10565..11941)
DNA (1377bp) protein (459aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:S
argH; argininosuccinate lyase (EC:4.3.2.1)
Argininosuccinate lyase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9Q660_9DELT rbh
13_1_20cm_2_scaffold_5722_18
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11884..13134)
DNA (1251bp) protein (417aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase
argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PZQ5_9FIRM
13_1_20cm_2_scaffold_5722_19
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13134..13610)
DNA (477bp) protein (159aa)
Arginine repressor n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9NX72_9DELT
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cys
arginine repressor ArgR
13_1_20cm_2_scaffold_5722_20
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13607..15691)
DNA (2085bp) protein (695aa)
Arginine biosynthesis bifunctional protein ArgJ/acetylglutamate kinase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9P114_9DELT rbh
Arginine biosynthesis protein ArgJ {ECO:0000313|EMBL:KFA94522.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;"
arginine biosynthesis bifunctional protein ArgJ
13_1_20cm_2_scaffold_5722_21
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15688..16713)
DNA (1026bp) protein (342aa)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_0015
N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9P3H8_9DELT rbh
13_1_20cm_2_scaffold_5722_22
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16970..17473
DNA (504bp) protein (168aa)
Transcription elongation factor GreA n=2 Tax=Anaeromyxobacter RepID=GREA_ANASK
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=290397 species="Bacteria
greA; transcription elongation factor GreA
13_1_20cm_2_scaffold_5722_23
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17478..19973
DNA (2496bp) protein (832aa)
ATP-dependent DNA helicase RecG; K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12] Tax=RBG_13_Deltaproteobacteria_52_11_curated
ATP-dependent DNA helicase RecG n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HC31_ANADF rbh
ATP-dependent DNA helicase RecG
13_1_20cm_2_scaffold_5722_24
unknown

Not on your lists

comp(19977..20258)
DNA (282bp) protein (94aa)

This feature has no annotations

13_1_20cm_2_scaffold_5722_25
unknown

Not on your lists

comp(20504..21343)
DNA (840bp) protein (280aa)

This feature has no annotations

13_1_20cm_2_scaffold_5722_26
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21492..21794
DNA (303bp) protein (101aa)
General secretion pathway protein E n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UEB2_MYXSD
General secretion pathway protein E {ECO:0000313|EMBL:AGC46210.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" so
general secretion pathway protein E
13_1_20cm_2_scaffold_5722_27
Desulfococcus oleovorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21938..23536
DNA (1599bp) protein (533aa)
Uncharacterized protein n=1 Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A8ZXP5_DESOH
Uncharacterized protein {ECO:0000313|EMBL:ABW67003.1}; TaxID=96561 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;" source="Desulfococcus
hypothetical protein
Displaying 27 items

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