ggKbase home page

13_1_20cm_2_scaffold_8256

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_8256_1
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..1713
DNA (1713bp) protein (571aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:000
Threonine--tRNA ligase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MFC2_CORCM rbh
thrS; threonyl-tRNA synthetase
13_1_20cm_2_scaffold_8256_2
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2082..2609
DNA (528bp) protein (176aa)
Translation initiation factor IF-3 n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=IF3_ANADF
Translation initiation factor IF-3 {ECO:0000255|HAMAP-Rule:MF_00080}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaero
infC; translation initiation factor IF-3
13_1_20cm_2_scaffold_8256_3
Geoalkalibacter subterraneus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2674..2883
DNA (210bp) protein (70aa)
50S ribosomal protein L35 n=1 Tax=Desulfovibrio desulfuricans RepID=UPI00036295F5
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=483547 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geo
50S ribosomal protein L35
13_1_20cm_2_scaffold_8256_4
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2970..3314
DNA (345bp) protein (115aa)
50S ribosomal protein L20 n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QIW1_9DELT
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystob
rplT; 50S ribosomal protein L20
13_1_20cm_2_scaffold_8256_5
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3389..4459
DNA (1071bp) protein (357aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-t
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UAN8_ANASK rbh
13_1_20cm_2_scaffold_8256_6
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4456..6849
DNA (2394bp) protein (798aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tR
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HBJ1_ANADF rbh
pheT; phenylalanyl-tRNA synthetase subunit beta
13_1_20cm_2_scaffold_8256_7
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6846..7427)
DNA (582bp) protein (194aa)
2-hydroxychromene-2-carboxylate isomerase family protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q09B82_STIAD
2-hydroxychromene-2-carboxylate isomerase family protein {ECO:0000313|EMBL:EAU68955.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacter
2-hydroxychromene-2-carboxylate isomerase family protein
13_1_20cm_2_scaffold_8256_8
Fischerella sp. JSC-11, Fischerella, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

comp(7449..8027)
DNA (579bp) protein (193aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_014
methionine sulfoxide reductase A n=1 Tax=Fischerella muscicola RepID=UPI0002FF80D7
methionine-S-sulfoxide reductase
13_1_20cm_2_scaffold_8256_9
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8218..8499
DNA (282bp) protein (94aa)
Integration host factor subunit alpha n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=IHFA_ANADF
Integration host factor subunit alpha {ECO:0000255|HAMAP-Rule:MF_00380}; Short=IHF-alpha {ECO:0000255|HAMAP-Rule:MF_00380};; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxoco
integration host factor subunit alpha
13_1_20cm_2_scaffold_8256_trna_1
unknown

Not on your lists

8566..8639
DNA (74bp)
transferRNA
13_1_20cm_2_scaffold_8256_10
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9350..9547)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MFB5_CORCM
Uncharacterized protein {ECO:0000313|EMBL:AFE05834.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Cor
hypothetical protein
13_1_20cm_2_scaffold_8256_11
unknown

Not on your lists

comp(9600..9875)
DNA (276bp) protein (92aa)

This feature has no annotations

13_1_20cm_2_scaffold_8256_12
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9978..10169
DNA (192bp) protein (64aa)
YcfA superfamily protein n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8H3Z8_CAUCN
Uncharacterized protein {ECO:0000313|EMBL:AAK25146.1}; TaxID=190650 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter cresce
YcfA superfamily protein
13_1_20cm_2_scaffold_8256_13
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10172..10750
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii OR214 RepID=R0E232_RALPI
Uncharacterized protein {ECO:0000313|EMBL:ENZ75597.1}; TaxID=1264675 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii
transcriptional regulator
13_1_20cm_2_scaffold_8256_14
unknown

Not on your lists

comp(10592..11254)
DNA (663bp) protein (221aa)

This feature has no annotations

13_1_20cm_2_scaffold_8256_15
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11504..11716)
DNA (213bp) protein (71aa)
Uncharacterized protein {ECO:0000313|EMBL:EGB99162.1}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (s
13_1_20cm_2_scaffold_8256_16
unknown

Not on your lists

11758..12855
DNA (1098bp) protein (366aa)

This feature has no annotations

13_1_20cm_2_scaffold_8256_17
unknown

Not on your lists

12866..13771
DNA (906bp) protein (302aa)

This feature has no annotations

13_1_20cm_2_scaffold_8256_18
unknown

Not on your lists

13737..14153
DNA (417bp) protein (139aa)

This feature has no annotations

13_1_20cm_2_scaffold_8256_19
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14522..15100
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii OR214 RepID=R0E232_RALPI
Uncharacterized protein {ECO:0000313|EMBL:ENZ75597.1}; TaxID=1264675 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii
inosine-5-monophosphate dehydrogenase
Displaying 20 items

View Taxonomy