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13_1_20cm_2_scaffold_5476_10

Organism: 13_1_20CM_2_Deltaproteobacteria_69_21

partial RP 29 / 55 MC: 1 BSCG 29 / 51 MC: 1 ASCG 6 / 38
Location: comp(8077..8418)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma subunit, ECF family n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C4E9_DESTA similarity UNIREF
DB: UNIREF100
  • Identity: 49.1
  • Coverage: 110.0
  • Bit_score: 106
  • Evalue 1.40e-20
sigma-70 family RNA polymerase sigma factor Tax=RBG_13_Deltaproteobacteria_49_15_curated UNIPROT
DB: UniProtKB
  • Identity: 53.5
  • Coverage: 101.0
  • Bit_score: 107
  • Evalue 1.50e-20
RNA polymerase, sigma subunit, ECF family similarity KEGG
DB: KEGG
  • Identity: 49.1
  • Coverage: 110.0
  • Bit_score: 106
  • Evalue 4.00e-21

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Taxonomy

RBG_13_Deltaproteobacteria_49_15_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 342
ATGAGCCACGAACGCACCATCGACCTCGCCGAACGCGCGCGAGCCGCGGCGAAGGGGGACAAGGTCGCGGCCCACGCGATCCTCGAGGCGGTTCAAGACGACGTCTACGGGCTTGCGCTTCGCATGCTGGGTCACCCCGCCGACGCGGAGGACGCCGCACAGGAGATCCTCGTCGTCGTCCTCACGCATCTCGGATCGTTCCGCGGCGAGAGCGCGTTCAGGACGTGGGTGTGGCGGATTGCGGCGAACCACCTGGCGCGAGTTCGACGAGGGCGCCGGGAAACGATCACGTTCGAGACGTTGGACGAACGGCTGCGGACGGGACTCCGCGAGGTTTCCTAG
PROTEIN sequence
Length: 114
MSHERTIDLAERARAAAKGDKVAAHAILEAVQDDVYGLALRMLGHPADAEDAAQEILVVVLTHLGSFRGESAFRTWVWRIAANHLARVRRGRRETITFETLDERLRTGLREVS*