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13_1_20cm_2_scaffold_5476

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_5476_1
Methylomonas methanica, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..632)
DNA (630bp) protein (210aa)
Polyphosphate:nucleotide phosphotransferase, PPK2 family n=1 Tax=Methylomonas methanica (strain MC09) RepID=G0A1L8_METMM
Polyphosphate:nucleotide phosphotransferase, PPK2 family {ECO:0000313|EMBL:AEG00079.1}; TaxID=857087 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylom
polyphosphate:nucleotide phosphotransferase
13_1_20cm_2_scaffold_5476_2
Terriglobus roseus, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(679..1698)
DNA (1020bp) protein (340aa)
Small-conductance mechanosensitive channel n=1 Tax=Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63) RepID=I3ZBJ8_TERRK rbh
Small-conductance mechanosensitive channel {ECO:0000313|EMBL:AFL86616.1}; Flags: Precursor;; TaxID=926566 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="
small-conductance mechanosensitive channel
13_1_20cm_2_scaffold_5476_3
unknown

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comp(1759..2442)
DNA (684bp) protein (228aa)

This feature has no annotations

13_1_20cm_2_scaffold_5476_4
Sideroxydans lithotrophicus, Sideroxydans, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2576..2974)
DNA (399bp) protein (133aa)
Putative uncharacterized protein n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CN66_SIDLE
Uncharacterized protein {ECO:0000313|EMBL:ADE12763.1}; Flags: Precursor;; TaxID=580332 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Sideroxydans.;" source="S
hypothetical protein
13_1_20cm_2_scaffold_5476_5
unknown

Not on your lists

3157..4242
DNA (1086bp) protein (362aa)

This feature has no annotations

13_1_20cm_2_scaffold_5476_6
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

4276..5901
DNA (1626bp) protein (542aa)
TPR repeat protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024U4_SOLUE rbh
TPR repeat-containing protein Tax=RBG_16_Acidobacteria_70_10_curated
hypothetical protein
13_1_20cm_2_scaffold_5476_7
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5920..6498)
DNA (579bp) protein (193aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; An
Sensory box histidine kinase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PA41_9DELT
bphP; sensor histidine kinase
13_1_20cm_2_scaffold_5476_8
Botryobasidium botryosum, Botryobasidium, Cantharellales, Agaricomycetes, Basidiomycota, Fungi

Not on your lists

comp(6544..7551)
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI0003715504
Uncharacterized protein {ECO:0000313|EMBL:KDQ15059.1}; TaxID=930990 species="Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Cantharellales; Botryobasidiaceae; Botryobasidiu
alcohol dehydrogenase
13_1_20cm_2_scaffold_5476_9
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7576..8016)
DNA (441bp) protein (147aa)
Putative RNA polymerase ECF-type sigma factor n=1 Tax=Nocardia brasiliensis ATCC 700358 RepID=K0EPE3_9NOCA
Uncharacterized protein {ECO:0000313|EMBL:KGM09618.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
putative RNA polymerase ECF-type sigma factor
13_1_20cm_2_scaffold_5476_10
RBG_13_Deltaproteobacteria_49_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8077..8418)
DNA (342bp) protein (114aa)
RNA polymerase, sigma subunit, ECF family n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C4E9_DESTA
sigma-70 family RNA polymerase sigma factor Tax=RBG_13_Deltaproteobacteria_49_15_curated
RNA polymerase, sigma subunit, ECF family
13_1_20cm_2_scaffold_5476_11
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(8555..9154)
DNA (600bp) protein (200aa)
Regulatory protein TetR n=1 Tax=Deinococcus maricopensis (strain DSM 21211 / LMG 22137 / NRRL B-23946 / LB-34) RepID=E8U455_DEIML
regulatory protein TetR Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
regulatory protein TetR
13_1_20cm_2_scaffold_5476_12
Pseudomonas chlororaphis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9244..9606
DNA (363bp) protein (121aa)
Cupin 2 barrel domain protein n=2 Tax=Pseudomonas RepID=J2YQ76_9PSED
Cupin 2 barrel domain protein {ECO:0000313|EMBL:EJL09069.1}; TaxID=1038921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas
cupin
13_1_20cm_2_scaffold_5476_13

Not on your lists

9627..9851
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2AUM9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD71650.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_1_20cm_2_scaffold_5476_14
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

9972..11063
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F4Z7_CONWI
Uncharacterized protein {ECO:0000313|EMBL:ADB48575.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woe
hypothetical protein
13_1_20cm_2_scaffold_5476_15
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11245..11616
DNA (372bp) protein (124aa)
DGPFAETKE domain-containing protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IPQ0_ANADE
DGPFAETKE domain-containing protein {ECO:0000313|EMBL:ABC80782.1}; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyx
DGPFAETKE domain-containing protein
13_1_20cm_2_scaffold_5476_16
unknown

Not on your lists

11817..12362
DNA (546bp) protein (182aa)

This feature has no annotations

13_1_20cm_2_scaffold_5476_17
Ralstonia sp. AU12-08, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12651..13397)
DNA (747bp) protein (249aa)
MFS transporter n=1 Tax=Ralstonia sp. AU12-08 RepID=S9RVL4_9RALS
MFS transporter {ECO:0000313|EMBL:EPX96333.1}; TaxID=1235457 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. AU12-08.;"
short-chain dehydrogenase/reductase SDR
13_1_20cm_2_scaffold_5476_18
Pseudomonas sp. GM48, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13581..14480
DNA (900bp) protein (300aa)
Transcriptional regulator n=1 Tax=Pseudomonas sp. GM48 RepID=J2S9X2_9PSED rbh
Transcriptional regulator {ECO:0000313|EMBL:EJM58449.1}; TaxID=1144330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp.
LysR family transcriptional regulator
13_1_20cm_2_scaffold_5476_19
R_OD1_Yanofskybacteria_43_42, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(14848..15915)
DNA (1068bp) protein (356aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003613F81
Ig family protein Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_43_42_curated
OmpA/MotB domain-containing protein
13_1_20cm_2_scaffold_5476_20
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15912..18713)
DNA (2802bp) protein (934aa)
Uncharacterized protein n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XMZ2_DESMR
Uncharacterized protein {ECO:0000313|EMBL:BAH77295.1}; TaxID=573370 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovib
hypothetical protein
13_1_20cm_2_scaffold_5476_21
unknown

Not on your lists

18847..19029
DNA (183bp) protein (61aa)

This feature has no annotations

Displaying 21 items

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