ggKbase home page

13_1_40cm_2_scaffold_1858

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_1858_1
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(72..974)
DNA (903bp) protein (301aa)
5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC:5.3.3.10)
5-carboxymethyl-2-hydroxymuconate Delta-isomerase {ECO:0000313|EMBL:ABU59657.1}; EC=5.3.3.10 {ECO:0000313|EMBL:ABU59657.1};; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales;
5-carboxymethyl-2-hydroxymuconate Delta-isomerase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NQ11_ROSCS
13_1_40cm_2_scaffold_1858_2
Ferrimicrobium acidiphilum, Ferrimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(971..1777)
DNA (807bp) protein (269aa)
ABC transporter related protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C6F4_SPHTD
High-affinity branched-chain amino acid transport ATP-binding protein LivF {ECO:0000313|EMBL:KJE76494.1}; TaxID=1121877 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrob
ABC transporter
13_1_40cm_2_scaffold_1858_3
Mycobacterium vaccae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1752..2543)
DNA (792bp) protein (264aa)
ABC transporter-like protein n=1 Tax=Mycobacterium vaccae ATCC 25954 RepID=K0UD89_MYCVA
ABC transporter-like protein {ECO:0000313|EMBL:EJZ05247.1}; TaxID=1194972 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium vaccae ATCC 259
ABC transporter-like protein
13_1_40cm_2_scaffold_1858_4
Mycobacterium vaccae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2543..3517)
DNA (975bp) protein (325aa)
Inner-membrane translocator n=1 Tax=Mycobacterium vaccae ATCC 25954 RepID=K0UEB8_MYCVA
Inner-membrane translocator {ECO:0000313|EMBL:EJZ05246.1}; TaxID=1194972 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium vaccae ATCC 2595
inner-membrane translocator
13_1_40cm_2_scaffold_1858_5
Ferrimicrobium acidiphilum, Ferrimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(3514..4398)
DNA (885bp) protein (295aa)
Inner-membrane translocator n=1 Tax=Mycobacterium vaccae ATCC 25954 RepID=K0UJT1_MYCVA
High-affinity branched-chain amino acid transport system permease protein LivH {ECO:0000313|EMBL:KJE76490.1}; TaxID=1121877 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimi
inner-membrane translocator
13_1_40cm_2_scaffold_1858_6
Ferrimicrobium acidiphilum, Ferrimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(4430..5761)
DNA (1332bp) protein (444aa)
Extracellular ligand-binding receptor n=1 Tax=Mycobacterium vaccae ATCC 25954 RepID=K0V2K5_MYCVA
Receptor family ligand binding region {ECO:0000313|EMBL:KJE76489.1}; TaxID=1121877 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ferrimicrobium.;" source="Fer
Extracellular ligand-binding receptor
13_1_40cm_2_scaffold_1858_7
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5853..6569
DNA (717bp) protein (239aa)
GntR family transcriptional regulator n=1 Tax=Glaciibacter superstes RepID=UPI0003B34BD8
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ACV58626.1}; TaxID=521098 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacillus
13_1_40cm_2_scaffold_1858_8
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(6566..7534)
DNA (969bp) protein (323aa)
2-dehydropantoate 2-reductase (EC:1.1.1.169)
2-dehydropantoate 2-reductase {ECO:0000313|EMBL:ABQ92681.1}; EC=1.1.1.169 {ECO:0000313|EMBL:ABQ92681.1};; Flags: Precursor;; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales;
2-dehydropantoate 2-reductase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5V1C8_ROSS1
13_1_40cm_2_scaffold_1858_9
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(7531..9030)
DNA (1500bp) protein (500aa)
AMP-dependent synthetase and ligase n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IBU9_9CHLR
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:EFO81329.1}; TaxID=765420 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" so
AMP-dependent synthetase and ligase
13_1_40cm_2_scaffold_1858_10
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

9069..10016
DNA (948bp) protein (316aa)
Uncharacterized protein id=4213232 bin=GWC2_Chloroflexi_73_18 species=unknown genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
amino acid oxidase Tax=GWC2_RIF_CHLX_73_18_curated
FAD-dependent oxidoreductase
13_1_40cm_2_scaffold_1858_11
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

10013..10444
DNA (432bp) protein (144aa)
putative oxidoreductase Tax=RBG_16_RIF_CHLX_72_14_curated
Uncharacterized protein id=4213232 bin=GWC2_Chloroflexi_73_18 species=unknown genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
putative amino acid oxidase
13_1_40cm_2_scaffold_1858_12
unknown

Not on your lists

comp(10447..10596)
DNA (150bp) protein (50aa)

This feature has no annotations

Displaying 12 items

View Taxonomy