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13_1_40cm_2_scaffold_308

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_308_1
unknown

Not on your lists

comp(3..938)
DNA (936bp) protein (312aa)

This feature has no annotations

13_1_40cm_2_scaffold_308_2
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(935..1858)
DNA (924bp) protein (308aa)
Cell envelope-related transcriptional attenuator n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TGJ0_9CHLR
Cell envelope-related transcriptional attenuator {ECO:0000313|EMBL:EFH90702.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" so
cell envelope-related transcriptional attenuator
13_1_40cm_2_scaffold_308_3
Mycobacterium tuberculosis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2026..3675)
DNA (1650bp) protein (550aa)
Mn2+/Fe2+ transporter n=1 Tax=Mycobacterium colombiense CECT 3035 RepID=J5EE14_9MYCO rbh
Uncharacterized protein {ECO:0000313|EMBL:KBZ60724.1}; TaxID=1324261 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source
Mn2 and fe2 transporters of the nramp family protein
13_1_40cm_2_scaffold_308_4
Mycobacterium avium, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3685..5013)
DNA (1329bp) protein (443aa)
MgtE intracellular domain protein n=1 Tax=Mycobacterium intracellulare (strain ATCC 13950 / DSM 43223 / JCM 6384 / NCTC 13025 / 3600) RepID=H8IWL6_MYCIA rbh
MgtE intracellular domain protein
CBS domain protein {ECO:0000313|EMBL:EUA27141.1}; TaxID=1299329 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Myco
13_1_40cm_2_scaffold_308_5
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(5093..6016)
DNA (924bp) protein (308aa)
Predicted protein n=1 Tax=Streptomyces sp. AA4 RepID=D9V9E5_9ACTO rbh
Predicted protein {ECO:0000313|EMBL:EFL09714.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
putative membrane protein
13_1_40cm_2_scaffold_308_6
Alicyclobacillus acidoterrestris, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6009..6575)
DNA (567bp) protein (189aa)
Cation transporter n=1 Tax=Alicyclobacillus acidoterrestris ATCC 49025 RepID=T0DT87_9BACL
Cation transporter {ECO:0000313|EMBL:EPZ52686.1}; TaxID=1356854 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacillus acidoterrestris AT
cation efflux protein
13_1_40cm_2_scaffold_308_7
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(6649..7074)
DNA (426bp) protein (142aa)
Universal stress protein n=1 Tax=Burkholderia sp. (strain 383) RepID=Q39NH6_BURS3
UspA domain-containing protein Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
universal stress family protein
13_1_40cm_2_scaffold_308_trna_1
unknown

Not on your lists

comp(7203..7275)
DNA (73bp)
transferRNA
13_1_40cm_2_scaffold_308_8
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

7319..8839
DNA (1521bp) protein (507aa)
carboxypeptidase Taq (EC:3.4.17.19)
Carboxypeptidase n=1 Tax=planctomycete KSU-1 RepID=I3INL5_9PLAN
Zn-dependent carboxypeptidase {ECO:0000313|EMBL:GAN34300.1}; TaxID=1197129 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia.;" so
13_1_40cm_2_scaffold_308_9
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8836..9801)
DNA (966bp) protein (322aa)
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q127K6_POLSJ rbh
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase {ECO:0000313|EMBL:ABE45286.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Pol
13_1_40cm_2_scaffold_308_10
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(9817..10707)
DNA (891bp) protein (297aa)
Pyruvate carboxyltransferase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C5D0_SPHTD rbh
pyruvate carboxyltransferase
Pyruvate carboxyltransferase {ECO:0000313|EMBL:ACZ37446.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;"
13_1_40cm_2_scaffold_308_11
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10732..11583)
DNA (852bp) protein (284aa)
hypothetical protein n=1 Tax=Arthrobacter sp. 131MFCol6.1 RepID=UPI00036FD88D
Acid phosphatase {ECO:0000313|EMBL:EWT04668.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
phosphoesterase
13_1_40cm_2_scaffold_308_12
Streptomyces tsukubaensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11616..13190
DNA (1575bp) protein (525aa)
Transporter n=1 Tax=Streptomyces tsukubaensis NRRL18488 RepID=I2MYF1_9ACTO rbh
Transporter {ECO:0000313|EMBL:EIF89798.1}; TaxID=1114943 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces tsukubaensis NRRL18488.;"
transporter
13_1_40cm_2_scaffold_308_13
Streptomyces natalensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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13190..13819
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Streptomyces scabrisporus RepID=UPI00037FAC09
TetR family transcriptional regulator {ECO:0000313|EMBL:KIZ14367.1}; TaxID=1240678 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces natalens
TetR family transcriptional regulator
13_1_40cm_2_scaffold_308_14
Streptomyces sp. HGB0020, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13802..14446)
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Streptomyces scabrisporus RepID=UPI00035E01F6
Uncharacterized protein {ECO:0000313|EMBL:EPD56224.1}; TaxID=1078086 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. HGB0020.;"
response regulator receiver protein
13_1_40cm_2_scaffold_308_15
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14443..15483)
DNA (1041bp) protein (347aa)
histidine kinase (EC:2.7.13.3)
Histidine kinase {ECO:0000313|EMBL:ADG88557.1}; EC=2.7.13.3 {ECO:0000313|EMBL:ADG88557.1};; TaxID=469371 species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Ther
hypothetical protein n=1 Tax=Nocardiopsis synnemataformans RepID=UPI00034BD206
13_1_40cm_2_scaffold_308_16
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15594..16412)
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PV58_KRIFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB33339.1}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 /
13_1_40cm_2_scaffold_308_17
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(16409..17317)
DNA (909bp) protein (303aa)
ABC transporter related protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CCR0_THET1
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ACZ42575.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
13_1_40cm_2_scaffold_308_18
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17423..17977)
DNA (555bp) protein (185aa)
Transcriptional regulator, TetR family n=1 Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3PZQ3_STANL
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ADD43590.1}; TaxID=446470 species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauen
13_1_40cm_2_scaffold_308_19
Knoellia sinensis, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18125..18559
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Rhodococcus equi NBRC 101255 = C 7 RepID=U5DVN9_COREQ
Uncharacterized protein {ECO:0000313|EMBL:KGN34288.1}; TaxID=1385520 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia sinensis KCTC 19936.;"
hypothetical protein
13_1_40cm_2_scaffold_308_20
Rhodococcus jostii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18815..19348
DNA (534bp) protein (178aa)
Short-chain dehydrogenase n=1 Tax=Rhodococcus sp. (strain RHA1) RepID=Q0S6S5_RHOSR
short-chain dehydrogenase
Short-chain dehydrogenase {ECO:0000313|EMBL:ABG96761.1}; TaxID=101510 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus jostii (strain RHA1).;"
13_1_40cm_2_scaffold_308_21

Not on your lists

comp(19361..19567)
DNA (207bp) protein (69aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI000366CFAC
Thioesterase superfamily protein {ECO:0000313|EMBL:AHE14579.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
13_1_40cm_2_scaffold_308_22
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19857..20174
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00037B3B30
Toxin-antitoxin system, antitoxin component, ArsR family {ECO:0000313|EMBL:EWM12430.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutz
ArsR family transcriptional regulator
13_1_40cm_2_scaffold_308_23
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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20171..20596
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI000374F505
Activator of Hsp90 ATPase 1 family protein
Activator of Hsp90 ATPase 1 family protein {ECO:0000313|EMBL:AEA26238.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardi
Displaying 24 items

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