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13_1_40cm_2_scaffold_3119

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_3119_1
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

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comp(1..522)
DNA (522bp) protein (174aa)
Uncharacterized protein n=3 Tax=Amycolatopsis mediterranei RepID=G0FW72_AMYMS
hypothetical protein Tax=RBG_16_RIF_CHLX_72_14_curated
hypothetical protein
13_1_40cm_2_scaffold_3119_2
unknown

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527..856
DNA (330bp) protein (110aa)

This feature has no annotations

13_1_40cm_2_scaffold_3119_trna_1
unknown

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938..1010
DNA (73bp)
transferRNA
13_1_40cm_2_scaffold_3119_3
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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1125..1985
DNA (861bp) protein (287aa)
CAAX amino terminal protease family n=1 Tax=Leptolyngbya sp. PCC 6406 RepID=L8LBL3_9CYAN
Abortive infection protein {ECO:0000313|EMBL:EFH79873.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter ra
abortive infection protein
13_1_40cm_2_scaffold_3119_4
Paenibacillus sp. TCA20, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2182..3486)
DNA (1305bp) protein (435aa)
Peptidase M23B n=1 Tax=Desulfotomaculum reducens (strain MI-1) RepID=A4J920_DESRM
Putative peptidase {ECO:0000313|EMBL:GAK41230.1}; TaxID=1499968 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. TCA20.;"
membrane protein
13_1_40cm_2_scaffold_3119_5
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(3483..5423)
DNA (1941bp) protein (647aa)
ABC transporter related protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MEZ2_RHOM4
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ACY47442.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;
13_1_40cm_2_scaffold_3119_6
Acanthamoeba castellanii, Acanthamoeba, Longamoebia, Eukaryota

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comp(5481..7217)
DNA (1737bp) protein (579aa)
Cellulase (Glycosyl hydrolase family 5) subfamily protein n=1 Tax=Acanthamoeba castellanii str. Neff RepID=L8GY69_ACACA
Cellulase (Glycosyl hydrolase family 5) subfamily protein {ECO:0000313|EMBL:ELR17897.1}; TaxID=1257118 species="Eukaryota; Amoebozoa; Discosea; Longamoebia; Centramoebida; Acanthamoebidae; Acanthamoeb
glycosidase
13_1_40cm_2_scaffold_3119_7
unknown

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comp(7214..7441)
DNA (228bp) protein (76aa)

This feature has no annotations

13_1_40cm_2_scaffold_3119_8
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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comp(7462..7656)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EED2_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF83044.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source
13_1_40cm_2_scaffold_3119_9
unknown

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comp(7813..8259)
DNA (447bp) protein (149aa)

This feature has no annotations

13_1_40cm_2_scaffold_3119_10
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

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8415..10235
DNA (1821bp) protein (607aa)
hypothetical protein n=1 Tax=Streptomyces sp. FxanaD5 RepID=UPI00037C7A09
CdaR family transcriptional regulator
Transcriptional regulator, CdaR {ECO:0000313|EMBL:ACV81170.1}; Flags: Precursor;; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella mu
13_1_40cm_2_scaffold_3119_11
Pelotomaculum thermopropionicum, Pelotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10475..11920)
DNA (1446bp) protein (482aa)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=370438 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Pelotomaculum.
Glutamine synthetase n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D3U8_PELTS
GlnA; glutamine synthetase
13_1_40cm_2_scaffold_3119_12
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

12197..12670
DNA (474bp) protein (158aa)
Ammonium transporter n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AUG3_RUBXD
ammonium transporter
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; Flags: Precursor;; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter
Displaying 13 items

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