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13_1_40cm_2_scaffold_358

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_358_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..207
DNA (207bp) protein (69aa)
ABC transporter n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8JB39_HALJB
ABC transporter-like protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
ABC transporter
13_1_40cm_2_scaffold_358_2
unknown

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comp(256..1659)
DNA (1404bp) protein (468aa)

This feature has no annotations

13_1_40cm_2_scaffold_358_3

Not on your lists

comp(1659..2201)
DNA (543bp) protein (181aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Frankia sp. CN3 RepID=G6HE94_9ACTO
Marine sediment metagenome DNA, contig: S01H1_L04602 {ECO:0000313|EMBL:GAF68614.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
ECF subfamily RNA polymerase sigma-24 subunit
13_1_40cm_2_scaffold_358_4
unknown

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comp(2239..2760)
DNA (522bp) protein (174aa)

This feature has no annotations

13_1_40cm_2_scaffold_358_5
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2789..4006
DNA (1218bp) protein (406aa)
alcohol dehydrogenase n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI00035EA970
Alcohol dehydrogenase {ECO:0000313|EMBL:KFA91127.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cyst
zinc-containing alcohol dehydrogenase
13_1_40cm_2_scaffold_358_6
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4022..4924)
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2NB13_9ACTO
integral membrane protein
Integral membrane protein {ECO:0000313|EMBL:AHH97318.1}; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
13_1_40cm_2_scaffold_358_7
GWA1_OD1_51_12, Parcubacteria, Bacteria

Not on your lists

5029..5436
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Nitrospina sp. AB-629-B18 RepID=UPI00037D548E
Uncharacterized protein {ECO:0000313|EMBL:KKW21071.1}; TaxID=1618799 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_51_12.;"
hypothetical protein
13_1_40cm_2_scaffold_358_8
Candidatus Acetothermus autotrophicum, Candidatus Acetothermum, Acetothermia, Bacteria

Not on your lists

comp(5455..7974)
DNA (2520bp) protein (840aa)
Adenylate/guanylate cyclase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SSM8_9BACT
Adenylate/guanylate cyclase {ECO:0000313|EMBL:BAL59164.1}; TaxID=1446466 species="Bacteria; Acetothermia; Candidatus Acetothermum.;" source="Candidatus Acetothermus autotrophicum.;"
LuxR family transcriptional regulator
13_1_40cm_2_scaffold_358_9
unknown

Not on your lists

comp(8002..8625)
DNA (624bp) protein (208aa)

This feature has no annotations

13_1_40cm_2_scaffold_358_10
GWB1_OP11_47_15, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

comp(8644..9555)
DNA (912bp) protein (304aa)
hypothetical protein; K01467 beta-lactamase [EC:3.5.2.6] id=15190971 bin=GWC1_OP11_49_16_COMPLETE species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
Penicillin-binding protein {ECO:0000313|EMBL:KKU61218.1}; TaxID=1618371 species="Bacteria; Microgenomates.;" source="Microgenomates (Beckwithbacteria) bacterium GW2011_GWB1_47_15.;"
beta-lactamase class A
13_1_40cm_2_scaffold_358_11
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(9673..11583)
DNA (1911bp) protein (637aa)
protein kinase; K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Serine/threonine protein kinase n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8GC93_CHLAD
serine/threonine protein kinase
13_1_40cm_2_scaffold_358_12
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11812..12963)
DNA (1152bp) protein (384aa)
Glycogen synthase (ADP-glucose) n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LVY4_ACIC1
glycogen synthase
Glycogen synthase (ADP-glucose) {ECO:0000313|EMBL:ABK53594.1}; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (str
13_1_40cm_2_scaffold_358_13
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(12984..16256)
DNA (3273bp) protein (1091aa)
Adenylyl cyclase class-3/4/guanylyl cyclase id=4413395 bin=GWC2_Chloroflexi_73_18 species=Verrucosispora maris genus=Verrucosispora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good + rbh
adenylyl cyclase class-3/4/guanylyl cyclase Tax=GWC2_RIF_CHLX_73_18_curated
adenylate/guanylate cyclase
13_1_40cm_2_scaffold_358_14
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16281..16988)
DNA (708bp) protein (236aa)
2-haloalkanoic acid dehalogenase, type II; K01560 2-haloacid dehalogenase [EC:3.8.1.2] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
Haloacid dehalogenase, type II n=1 Tax=Mycobacterium rhodesiae JS60 RepID=G4HY50_MYCRH
haloacid dehalogenase
13_1_40cm_2_scaffold_358_15
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(16993..17271)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EMN5_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF85948.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source
hypothetical protein
13_1_40cm_2_scaffold_358_16
unknown

Not on your lists

17395..17511
DNA (117bp) protein (39aa)

This feature has no annotations

13_1_40cm_2_scaffold_358_17
unknown

Not on your lists

17577..17657
DNA (81bp) protein (27aa)

This feature has no annotations

Displaying 17 items

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