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13_1_40cm_2_scaffold_3794

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_3794_1
RBG_13_Chloroflexi_54_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(3..590)
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Bacteria RepID=UPI00037BE4B4
phosphomannomutase
phosphoglucomutase/phosphomannomutase Tax=RBG_13_Chloroflexi_54_8_curated
13_1_40cm_2_scaffold_3794_2
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(612..1673)
DNA (1062bp) protein (354aa)
Mannose-1-phosphate guanylyltransferase ManC {ECO:0000313|EMBL:KDR94549.1}; EC=2.7.7.13 {ECO:0000313|EMBL:KDR94549.1};; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostr
mannose-1-phosphate guanylyltransferase (EC:2.7.7.22)
Mannose-1-phosphate guanylyltransferase (GDP) n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C7J0_SPHTD
13_1_40cm_2_scaffold_3794_3
Bhargavaea cecembensis, Bhargavaea, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1670..2359)
DNA (690bp) protein (230aa)
S-adenosylmethionine synthase {ECO:0000256|RuleBase:RU000541}; EC=2.5.1.6 {ECO:0000256|RuleBase:RU000541};; TaxID=1235279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Bhargavaea
metK; S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase n=1 Tax=Bhargavaea cecembensis DSE10 RepID=M7NEQ0_9BACL
13_1_40cm_2_scaffold_3794_4
Mycobacterium gastri, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2863..3720)
DNA (858bp) protein (286aa)
Patatin n=1 Tax=Mycobacterium kansasii ATCC 12478 RepID=U5WZT1_MYCKA
Patatin {ECO:0000313|EMBL:ETW21677.1}; TaxID=1436723 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium gastri 'Wayne'.;"
patatin
13_1_40cm_2_scaffold_3794_5
RBG_16_Chloroflexi_60_22_curated, Chloroflexi, Bacteria

Not on your lists

comp(3750..4286)
DNA (537bp) protein (179aa)
S-adenosyl-L-homocysteine hydrolase (EC:3.3.1.1); K01251 adenosylhomocysteinase [EC:3.3.1.1] Tax=RBG_16_Chloroflexi_60_22_curated
S-adenosyl-L-homocysteine hydrolase (EC:3.3.1.1)
Adenosylhomocysteinase n=1 Tax=Sulfurihydrogenibium sp. (strain YO3AOP1) RepID=B2V774_SULSY
13_1_40cm_2_scaffold_3794_6
GWC2_SYX_53_9_curated, Bacteria

Not on your lists

comp(4283..4969)
DNA (687bp) protein (229aa)
ahcY; S-adenosyl-L-homocysteine hydrolase (EC:3.3.1.1); K01251 adenosylhomocysteinase [EC:3.3.1.1] Tax=GWC2_SYX_53_9_curated
ahcY; S-adenosyl-L-homocysteine hydrolase (EC:3.3.1.1)
Adenosylhomocysteinase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TJE1_9CHLR
13_1_40cm_2_scaffold_3794_7
Thermotoga maritima, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

comp(4985..5512)
DNA (528bp) protein (176aa)
adenine phosphoribosyltransferase (EC:2.4.2.7)
Adenine phosphoribosyltransferase {ECO:0000313|EMBL:AGL50315.1}; EC=2.4.2.7 {ECO:0000313|EMBL:AGL50315.1};; TaxID=243274 species="Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga.;" so
Adenine phosphoribosyltransferase n=1 Tax=Thermotoga sp. EMP RepID=J9HCD6_9THEM
13_1_40cm_2_scaffold_3794_8
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(5509..6360)
DNA (852bp) protein (284aa)
NAD-dependent epimerase/dehydratase family protein; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] Tax=GWC2_Gemmatimonadetes_71_10_curated
epimerase n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745D93
NAD-dependent epimerase/dehydratase
13_1_40cm_2_scaffold_3794_9
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

Not on your lists

comp(6446..7741)
DNA (1296bp) protein (432aa)
putative UDP-glucose 6-dehydrogenase; K00012 UDPglucose 6-dehydrogenase [EC:1.1.1.22] Tax=RBG_16_Chloroflexi_54_18_curated
UDP-glucose 6-dehydrogenase (EC:1.1.1.22)
UDP-glucose 6-dehydrogenase n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N0K2_ANATU
13_1_40cm_2_scaffold_3794_10
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(7752..8831)
DNA (1080bp) protein (360aa)
Glycosyl transferase group 1 n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QE38_DESB2
group 1 glycosyl transferase Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
group 1 glycosyl transferase
13_1_40cm_2_scaffold_3794_11
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

8943..10130
DNA (1188bp) protein (396aa)
putative UDP-glucose/GDP-mannose dehydrogenase; K02472 UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.-] Tax=RBG_16_RIF_CHLX_72_14_curated
Nucleotide sugar dehydrogenase n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QAW8_CATAD
nucleotide sugar dehydrogenase
13_1_40cm_2_scaffold_3794_12
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

10450..11097
DNA (648bp) protein (216aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Mycobacterium rhodesiae JS60 RepID=G4I596_MYCRH
NAD-dependent epimerase/dehydratase Tax=RBG_16_RIF_CHLX_70_13_curated
NAD-dependent epimerase/dehydratase
13_1_40cm_2_scaffold_3794_13
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

11130..11828
DNA (699bp) protein (233aa)
Glycosyl transferase family 2 n=1 Tax=Mycobacterium rhodesiae JS60 RepID=G4I598_MYCRH
glycosyl transferase family protein Tax=RBG_16_RIF_CHLX_72_14_curated
glycosyl transferase
13_1_40cm_2_scaffold_3794_14
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(11809..12837)
DNA (1029bp) protein (343aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; R
dTDP-glucose 4,6-dehydratase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UTQ0_ROSS1
dTDP-glucose 4,6-dehydratase
13_1_40cm_2_scaffold_3794_15
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(12834..13301)
DNA (468bp) protein (156aa)
dTDP-4-dehydrorhamnose 3 5-epimerase-like protein; K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] Tax=RBG_16_Chloroflexi_68_14_curated
SpsL id=3290784 bin=GWF2_Planctomycete_41_51 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
dTDP-4-dehydrorhamnose 3,5 epimerase
13_1_40cm_2_scaffold_3794_16
CG_Arma_02, Armatimonadetes, Bacteria

Not on your lists

comp(13298..14044)
DNA (747bp) protein (249aa)
rfbA; glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24); K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] id=7200681 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
rfbA; glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
nucleotidyl transferase Tax=CG_Arma_02
13_1_40cm_2_scaffold_3794_17
unknown

Not on your lists

14091..14489
DNA (399bp) protein (133aa)

This feature has no annotations

13_1_40cm_2_scaffold_3794_18
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14796..15884
DNA (1089bp) protein (363aa)
DNA polymerase IV (EC:2.7.7.7)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=351607 species="Bacteria; Actinobacteria; Aci
DNA polymerase IV n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LUV6_ACIC1
13_1_40cm_2_scaffold_3794_19
unknown

Not on your lists

16138..16644
DNA (507bp) protein (169aa)

This feature has no annotations

13_1_40cm_2_scaffold_3794_20
RIFOXYC2_FULL_OD1_Falkowbacteria_48_21_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(16560..17948)
DNA (1389bp) protein (463aa)
Membrane protein involved in the export of O-antigen and teichoic acid n=1 Tax=Methanobacterium sp. Maddingley MBC34 RepID=K6U8I5_9EURY
polysaccharide biosynthesis protein Tax=RIFOXYC2_FULL_OD1_Falkowbacteria_48_21_curated
hypothetical protein
13_1_40cm_2_scaffold_3794_21
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists

18094..19083
DNA (990bp) protein (330aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2); K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2] Tax=RBG_16_RIF_CHLX_69_14_curated
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase id=3440871 bin=GWC2_Chloroflexi_73_18 species=Dehalogenimonas lykanthroporepellens genus=Dehalogenimonas taxon_order=unknown taxon_class=Dehalococcoidia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
13_1_40cm_2_scaffold_3794_22
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19107..19643
DNA (537bp) protein (179aa)
FAD dependent oxidoreductase n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2EZJ5_CLOS4
[Fe-S]-binding protein {ECO:0000313|EMBL:KJK33510.1}; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Noca
yhfW; Rieske 2Fe-2S iron-sulfur protein YhfW
13_1_40cm_2_scaffold_3794_23
Paenibacillus sp. JCM 10914, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19653..20348
DNA (696bp) protein (232aa)
cytochrome B6 n=1 Tax=Paenibacillus fonticola RepID=UPI00035DB1D6
Menaquinone-cytochrome c reductase, cytochrome B subunit {ECO:0000313|EMBL:GAE04690.1}; TaxID=1236974 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Pae
cytochrome b6
13_1_40cm_2_scaffold_3794_24
Paenibacillus larvae, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20348..21028
DNA (681bp) protein (227aa)
menaquinol:cytochrome c oxidoreductase-like protein n=2 Tax=Paenibacillus larvae RepID=UPI0001F85B30
qcrC; menaquinol-cytochrome c reductase cytochrome b/c subunit QcrC
Menaquinol-cytochrome c reductase cytochrome b/c subunit QcrC {ECO:0000313|EMBL:AHD05213.1}; TaxID=697284 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source=
13_1_40cm_2_scaffold_3794_25
R_RIF_OP11_01_43_15b, RIF-OP11-1, Microgenomates, Bacteria

Not on your lists

comp(21036..22571)
DNA (1536bp) protein (512aa)
Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1FDY3_9CHLO id=66679 bin=ACD48 species=Micromonas sp. RCC299 genus=Micromonas taxon_order=Mamiellales taxon_class=Mamiellophyceae phylum=Chlorophyta tax=ACD48 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OP11_01_43_15b_curated
hypothetical protein
13_1_40cm_2_scaffold_3794_26
Desulfosporosinus sp. I2, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22627..22995
DNA (369bp) protein (123aa)
Thioredoxin n=2 Tax=root RepID=K9E1I2_9BURK
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1617025 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. I2.;"
thioredoxin
13_1_40cm_2_scaffold_3794_27

Not on your lists

comp(23070..23447)
DNA (378bp) protein (126aa)
nitrogen regulatory protein P-II n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C36B5
Uncharacterized protein {ECO:0000313|EMBL:KKL07539.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
nitrogen regulatory protein P-II
13_1_40cm_2_scaffold_3794_28
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(23444..24541)
DNA (1098bp) protein (366aa)
Ammonium transporter n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F545_CONWI
ammonium transporter
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woes
Displaying 28 items

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