ggKbase home page

13_1_40cm_2_scaffold_3960

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_3960_1
unknown

Not on your lists

1..150
DNA (150bp) protein (50aa)

This feature has no annotations

13_1_40cm_2_scaffold_3960_2
BJP_IG2069_Chloroflexi_70_12, Chloroflexi, Bacteria

Not on your lists

281..1042
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Desmospora sp. 8437 RepID=F5SJA3_9BACL
hypothetical protein
Tax=BJP_IG2069_Chloroflexi_70_12
13_1_40cm_2_scaffold_3960_3
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

1039..1443
DNA (405bp) protein (135aa)
Putative uncharacterized protein n=1 Tax=Streptomyces violaceusniger Tu 4113 RepID=G2NY22_STRVO
hypothetical protein Tax=RBG_16_RIF_CHLX_70_13_curated
hypothetical protein
13_1_40cm_2_scaffold_3960_4
unknown

Not on your lists

1493..2362
DNA (870bp) protein (290aa)

This feature has no annotations

13_1_40cm_2_scaffold_3960_5
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2399..3226
DNA (828bp) protein (276aa)
Polyphosphate kinase 2, PA0141 family n=1 Tax=Frankia sp. QA3 RepID=I8QT36_9ACTO rbh
hypothetical protein
Polyphosphate kinase 2, PA0141 family {ECO:0000313|EMBL:EIV95627.1}; TaxID=710111 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
13_1_40cm_2_scaffold_3960_6
Streptomyces cattleya, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3231..3611
DNA (381bp) protein (127aa)
Oxidoreductase n=1 Tax=Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) RepID=F8JYM7_STREN
oxidoreductase
Oxidoreductase {ECO:0000313|EMBL:AEW97250.1}; TaxID=1003195 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces cattleya (strain ATCC 35852 / D
13_1_40cm_2_scaffold_3960_7
unknown

Not on your lists

comp(3608..3952)
DNA (345bp) protein (115aa)

This feature has no annotations

13_1_40cm_2_scaffold_3960_8
unknown

Not on your lists

comp(4022..4144)
DNA (123bp) protein (41aa)

This feature has no annotations

13_1_40cm_2_scaffold_3960_9
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

4349..5605
DNA (1257bp) protein (419aa)
Major facilitator superfamily MFS_1 n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TQ26_9CHLR
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:EFH87611.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedono
major facilitator superfamily protein
13_1_40cm_2_scaffold_3960_10
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5595..6338
DNA (744bp) protein (248aa)
Methyltransferase type 11 n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A6S9_THECD
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:ACY98333.1}; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (s
13_1_40cm_2_scaffold_3960_11
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

6345..6725
DNA (381bp) protein (127aa)
seg 21..36 Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
seg 21..36 id=72564 bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
13_1_40cm_2_scaffold_3960_12
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6737..7465)
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI000378CACB
ABC transporter {ECO:0000313|EMBL:EIM71646.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibio
ABC transporter
13_1_40cm_2_scaffold_3960_13
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(7443..8204)
DNA (762bp) protein (254aa)
ABC transporter n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI000375DD13
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
ABC transporter-like protein
13_1_40cm_2_scaffold_3960_14
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8201..9238)
DNA (1038bp) protein (346aa)
Putative high-affinity branched-chain amino acid transporter membrane protein n=2 Tax=Bordetella bronchiseptica RepID=K0MFP8_BORBM
high-affinity branched-chain amino acid transporter membrane protein
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:KDD55427.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordete
13_1_40cm_2_scaffold_3960_15
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9280..10149)
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI000375163B
Uncharacterized protein {ECO:0000313|EMBL:EKS28638.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
branched-chain amino acid ABC transporter permease
13_1_40cm_2_scaffold_3960_16
Thermodesulfovibrio yellowstonii, Thermodesulfovibrio, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(10171..11397)
DNA (1227bp) protein (409aa)
Leu/ile/val-binding protein n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YK45_THEYD
leu/ile/val-binding protein
Leu/ile/val-binding protein {ECO:0000313|EMBL:ACI21571.1}; TaxID=289376 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Thermodesulfovibrio.;" source="Thermodesulfovibrio yellowstonii (
13_1_40cm_2_scaffold_3960_17
unknown

Not on your lists

11587..12060
DNA (474bp) protein (158aa)

This feature has no annotations

Displaying 17 items

View Taxonomy