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13_1_40cm_2_scaffold_52

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_52_1
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

2..355
DNA (354bp) protein (118aa)
trxB; thioredoxin reductase (EC:1.8.1.9); K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Thioredoxin reductase n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D2B9_PELTS
TrxB; thioredoxin reductase
13_1_40cm_2_scaffold_52_2
RBG_13_OP11_40_15_curated, Microgenomates, Bacteria

Not on your lists

comp(417..2075)
DNA (1659bp) protein (553aa)
hypothetical protein
hypothetical protein Tax=RBG_13_OP11_40_15_curated
Putative uncharacterized protein id=4913979 bin=GWC2_ACD39_50_8 species=Marinithermus hydrothermalis genus=Marinithermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWC2_ACD39_50_8 organism_group=ACD39
13_1_40cm_2_scaffold_52_3
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(2392..3468)
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C1G2_SPHTD
mrp; protein mrp Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
hypothetical protein
13_1_40cm_2_scaffold_52_4
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

3501..4115
DNA (615bp) protein (205aa)
uracil-DNA glycosylase; K03648 uracil-DNA glycosylase [EC:3.2.2.27] Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Uracil-DNA glycosylase superfamily n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C5U1_SPHTD
uracil-DNA glycosylase superfamily
13_1_40cm_2_scaffold_52_5
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

4154..4474
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B4435A
Uncharacterized protein Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
hypothetical protein
13_1_40cm_2_scaffold_52_6
R_WOR_1_53_15, WOR-1, Bacteria

Not on your lists

4493..5167
DNA (675bp) protein (225aa)
16S ribosomal RNA methyltransferase RsmE; K09761 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] Tax=RIFCSPHIGHO2_01_FULL_WOR_1_53_15_curated
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Paenibacillus vortex V453 RepID=E5YU86_9BACL
hypothetical protein
13_1_40cm_2_scaffold_52_7
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

5220..5984
DNA (765bp) protein (255aa)
NUDIX hydrolase n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IFT9_9CHLR
NUDIX hydrolase {ECO:0000313|EMBL:EFO79980.1}; TaxID=765420 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" source="Oscillochloris
NUDIX hydrolase
13_1_40cm_2_scaffold_52_8
Marinithermus hydrothermalis, Marinithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

5965..6807
DNA (843bp) protein (281aa)
nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19)
Nicotinate-nucleotide pyrophosphorylase {ECO:0000313|EMBL:AEB12815.1}; EC=2.4.2.19 {ECO:0000313|EMBL:AEB12815.1};; TaxID=869210 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermacea
Nicotinate-nucleotide pyrophosphorylase n=1 Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NN76_MARHT
13_1_40cm_2_scaffold_52_9
Candidatus Acetothermus autotrophicum, Candidatus Acetothermum, Acetothermia, Bacteria

Not on your lists

6798..7802
DNA (1005bp) protein (335aa)
Quinolinate synthase A {ECO:0000256|HAMAP-Rule:MF_00568}; EC=2.5.1.72 {ECO:0000256|HAMAP-Rule:MF_00568};; TaxID=1446466 species="Bacteria; Acetothermia; Candidatus Acetothermum.;" source="Candidatus A
quinolinate synthetase complex subunit A (EC:2.1.1.63)
Quinolinate synthase A n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SVP4_9BACT rbh
13_1_40cm_2_scaffold_52_10
Brachybacterium faecium, Brachybacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7799..9232
DNA (1434bp) protein (478aa)
L-aspartate oxidase (EC:1.4.3.16)
L-aspartate oxidase {ECO:0000256|RuleBase:RU362049}; EC=1.4.3.16 {ECO:0000256|RuleBase:RU362049};; TaxID=446465 species="Bacteria; Actinobacteria; Micrococcales; Dermabacteraceae; Brachybacterium.;" s
L-aspartate oxidase n=1 Tax=Brachybacterium faecium (strain ATCC 43885 / DSM 4810 / NCIB 9860) RepID=C7MGQ9_BRAFD
13_1_40cm_2_scaffold_52_11
unknown

Not on your lists

comp(9229..9546)
DNA (318bp) protein (106aa)

This feature has no annotations

13_1_40cm_2_scaffold_52_12
Carboxydothermus hydrogenoformans, Carboxydothermus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

9595..11400
DNA (1806bp) protein (602aa)
Elongation factor 4 {ECO:0000255|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000255|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000255|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000255|HAMAP
Elongation factor 4 n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=LEPA_CARHZ rbh
lepA; GTP-binding protein LepA
13_1_40cm_2_scaffold_52_13
unknown

Not on your lists

11447..12442
DNA (996bp) protein (332aa)

This feature has no annotations

13_1_40cm_2_scaffold_52_14
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(12443..13414)
DNA (972bp) protein (324aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CIZ7_THET1
NDP-sugar oxidoreductase Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
NAD-dependent epimerase/dehydratase
13_1_40cm_2_scaffold_52_15

Not on your lists

13436..14005
DNA (570bp) protein (190aa)
YbaK/prolyl-tRNA synthetase associated protein n=1 Tax=Streptomyces tsukubaensis NRRL18488 RepID=I2MZR8_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KKL79209.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
YbaK/prolyl-tRNA synthetase associated protein
13_1_40cm_2_scaffold_52_16
unknown

Not on your lists

14021..14344
DNA (324bp) protein (108aa)

This feature has no annotations

13_1_40cm_2_scaffold_52_17
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

14346..15452
DNA (1107bp) protein (369aa)
coproporphyrinogen III oxidase, anaerobic (EC:1.3.99.22); K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22] Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
Coproporphyrinogen III oxidase, anaerobic n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LHZ9_SYNFM
putative oxygen-independent coproporphyrinogen III oxidase
13_1_40cm_2_scaffold_52_18
RBG_19FT_COMBO_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

Not on your lists

15485..16501
DNA (1017bp) protein (339aa)
Heat-inducible transcription repressor hrcA n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8MZI5_ANATU
hrcA; heat-inducible transcription repressor HrcA; K03705 heat-inducible transcriptional repressor Tax=RBG_19FT_COMBO_Chloroflexi_50_10_curated
hrcA; heat-inducible transcription repressor HrcA
13_1_40cm_2_scaffold_52_19
Candidatus Desulforudis audaxviator, Candidatus Desulforudis, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16535..17113
DNA (579bp) protein (193aa)
Protein GrpE n=1 Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I6A0_DESAP
GrpE protein HSP-70 cofactor
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=477974 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Candidatus Des
13_1_40cm_2_scaffold_52_20
Thermosediminibacter oceani, Thermosediminibacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

17131..18249
DNA (1119bp) protein (373aa)
Chaperone protein DnaJ n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S2P5_THEOJ
chaperone protein DnaJ
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=555079 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family I
13_1_40cm_2_scaffold_52_21
unknown

Not on your lists

18363..18662
DNA (300bp) protein (100aa)

This feature has no annotations

13_1_40cm_2_scaffold_52_22
Cyanothece sp. PCC 7425, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

18778..22389
DNA (3612bp) protein (1204aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HP13_CYAP4
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:ACL45600.1}; TaxID=395961 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="C
13_1_40cm_2_scaffold_52_23
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22562..23296)
DNA (735bp) protein (245aa)
Transcriptional repressor DcmR n=2 Tax=Rhizobiales RepID=DCMR_METED
excisionase family DNA binding domain-containing protein
DNA binding domain protein, excisionase family {ECO:0000313|EMBL:ADJ22530.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" sou
13_1_40cm_2_scaffold_52_24
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23412..24347
DNA (936bp) protein (312aa)
Transcriptional regulator, LysR family n=2 Tax=Saccharomonospora RepID=G4J2F9_9PSEU
bacterial regulatory helix-turn-helix, lysR family protein
Isoleucine biosynthesis transcriptional activator {ECO:0000313|EMBL:ABA48998.1}; TaxID=320372 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; ps
13_1_40cm_2_scaffold_52_25
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24395..25228
DNA (834bp) protein (278aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
spsK; Spore coat polysaccharide biosynthesis protein spsK Tax=RBG_13_Deltaproteobacteria_61_14_curated
Spore coat polysaccharide biosynthesis protein spsK id=2772882 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_2_scaffold_52_26
GWA1_OP11_Woesebacteria_41_8_curated, Woesebacteria, Microgenomates, Bacteria

Not on your lists

25557..27785
DNA (2229bp) protein (743aa)
NV12749; alpha-1,3/1,6-mannosyltransferase ALG2-like; K03843 alpha-1,3/alpha-1,6-mannosyltransferase [EC:2.4.1.132 2.4.1.257] Tax=GWA1_OP11_Woesebacteria_41_8_curated
Glycosyltransferase n=1 Tax=uncultured marine crenarchaeote E6-3G RepID=G9BAK6_9CREN id=1246954 bin=RBG9 species=uncultured marine crenarchaeote E6-3G genus=unknown taxon_order=unknown taxon_class=unknown phylum=Crenarchaeota tax=RBG9 organism_group=Chloroflexi
hypothetical protein
13_1_40cm_2_scaffold_52_27
RBG_16_OP11_Woesebacteria_42_24_curated, Woesebacteria, Microgenomates, Bacteria

Not on your lists

27802..28650
DNA (849bp) protein (283aa)
putative methyltransferase id=1246957 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
methyltransferase type 11 Tax=RBG_16_OP11_Woesebacteria_42_24_curated
methyltransferase type 11
13_1_40cm_2_scaffold_52_28
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

Not on your lists

comp(28647..29627)
DNA (981bp) protein (327aa)
NAD-dependent epimerase/dehydratase; K12454 CDP-paratose 2-epimerase [EC:5.1.3.10] Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
CDP-tyvelose-2-epimerase (EC:5.1.3.-)
CDP-paratose 2-epimerase n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI000364027C
13_1_40cm_2_scaffold_52_29
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

29681..30859
DNA (1179bp) protein (393aa)
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein id=14428743 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
Ferritin-like domain fused to DUF125 family domain
13_1_40cm_2_scaffold_52_30
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(30860..31228)
DNA (369bp) protein (123aa)
hypothetical protein id=1245253 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hypothetical protein Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
Displaying items 1-30 of 41 in total

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