ggKbase home page

13_1_40cm_2_scaffold_5702

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_5702_1
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

405..1283
DNA (879bp) protein (293aa)
MOSC domain containing protein id=14632418 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin9_gal15 organism_group=GAL15
MOSC domain containing protein Tax=CSP1_3_Armatimonadetes
MOSC domain containing protein
13_1_40cm_2_scaffold_5702_2

Not on your lists

1563..2018
DNA (456bp) protein (152aa)
SRPBCC ligand-binding domain superfamily protein n=1 Tax=uncultured bacterium CSL11 RepID=G4WVD6_9BACT
Marine sediment metagenome DNA, contig: S01H1_S07985 {ECO:0000313|EMBL:GAG03685.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
13_1_40cm_2_scaffold_5702_3
unknown

Not on your lists

comp(2226..2654)
DNA (429bp) protein (143aa)

This feature has no annotations

13_1_40cm_2_scaffold_5702_4
Streptomyces sp. CNQ-509, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3274..5091
DNA (1818bp) protein (606aa)
hypothetical protein n=1 Tax=Streptomyces sp. CNS335 RepID=UPI00036C8B1A
Uncharacterized protein {ECO:0000313|EMBL:AKH81045.1}; TaxID=444103 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. CNQ-509.;"
putative phytochrome sensor protein
13_1_40cm_2_scaffold_5702_5
RLO_PLX_64_10, Bacteria

Not on your lists

5188..6852
DNA (1665bp) protein (555aa)
acyl-CoA synthetase/AMP-acid ligase Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
Acyl-CoA synthetase/AMP-acid ligase id=4779300 bin=GWC2_Syntrophus__56_31 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
acyl-CoA synthetase/AMP-acid ligase
13_1_40cm_2_scaffold_5702_6
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6845..8128
DNA (1284bp) protein (428aa)
ABC-type branched-chain amino acid transport system, periplasmic component n=1 Tax=Burkholderia sp. BT03 RepID=J2IJH2_9BURK
Urea ABC transporter {ECO:0000313|EMBL:KDR40289.1}; Urea ABC transporter, urea binding protein {ECO:0000313|EMBL:CDY74677.1}; TaxID=60547 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkhol
urea ABC superfamily ATP binding cassette transporter, binding protein
13_1_40cm_2_scaffold_5702_7
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8195..9055
DNA (861bp) protein (287aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XLE3_VARPD
ABC transporter permease {ECO:0000313|EMBL:KDR40290.1}; Urea ABC transporter, permease protein UrtB {ECO:0000313|EMBL:CDY74678.1}; TaxID=60547 species="Bacteria; Proteobacteria; Betaproteobacteria; Bu
branched-chain amino acid ABC transporter, permease protein
13_1_40cm_2_scaffold_5702_8
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9052..10845
DNA (1794bp) protein (598aa)
Uncharacterized protein n=1 Tax=Spiribacter sp. UAH-SP71 RepID=U5T1Z1_9GAMM
Urea ABC transporter {ECO:0000313|EMBL:KDR40291.1}; TaxID=60547 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glathei.;
hypothetical protein
13_1_40cm_2_scaffold_5702_9
Methylobacterium oryzae, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10829..11533
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 77 RepID=UPI0003680FD6
Urea ABC transporter, ATP-binding protein
Urea ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AIQ93238.1}; TaxID=693986 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" sour
13_1_40cm_2_scaffold_5702_10
unknown

Not on your lists

11546..11764
DNA (219bp) protein (73aa)

This feature has no annotations

13_1_40cm_2_scaffold_5702_11
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11761..13221
DNA (1461bp) protein (487aa)
Aspartyl-tRNA(Asn) amidotransferase subunit A @ Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000313|EMBL:CDY74675.1}; EC=6.3.5.6 {ECO:0000313|EMBL:CDY74675.1};; EC=6.3.5.7 {ECO:0000313|EMBL:CDY
amidase (EC:3.5.1.4)
Amidase n=1 Tax=Burkholderia graminis C4D1M RepID=B1G4X5_9BURK rbh
Displaying 11 items

View Taxonomy