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13_1_40cm_2_scaffold_221_13

Organism: 13_1_40CM_2_Actinobacteria_65_8

partial RP 18 / 55 MC: 2 BSCG 21 / 51 MC: 1 ASCG 6 / 38
Location: 5534..5728

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EGR1_AMICL similarity UNIREF
DB: UNIREF100
  • Identity: 78.0
  • Coverage: 59.0
  • Bit_score: 91
  • Evalue 3.60e-16
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 78.0
  • Coverage: 59.0
  • Bit_score: 91
  • Evalue 9.90e-17
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium similarity UNIPROT
DB: UniProtKB
  • Identity: 78.0
  • Coverage: 59.0
  • Bit_score: 91
  • Evalue 4.90e-16

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Taxonomy

Aminobacterium colombiense → Aminobacterium → Synergistales → Synergistia → Synergistetes → Bacteria

Sequences

DNA sequence
Length: 195
ATGGGCCTAACGCTCGAGCGGGTGCGGGAGGTGCTCCAGCTCCGTTTTGGGCTCATTGATGGCCGCGAGTGCACCCTGGAGGAGGTCGGCAAGCGCTTTGGCGTGAGCCGCGAGCGCATCCGCCAGATCGAGTCCAAGACCCTGCGCAACCTGCGACATCCCTCGCGCTCCCAGAAGCTGCGGGGCCACATGTAG
PROTEIN sequence
Length: 65
MGLTLERVREVLQLRFGLIDGRECTLEEVGKRFGVSRERIRQIESKTLRNLRHPSRSQKLRGHM*