ggKbase home page

13_1_40cm_2_scaffold_221

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_221_1
unknown

Not on your lists

3..86
DNA (84bp) protein (28aa)

This feature has no annotations

13_1_40cm_2_scaffold_221_2
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

389..718
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Agromyces italicus RepID=UPI0003B4F2A4
hypothetical protein; K07075 Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
hypothetical protein
13_1_40cm_2_scaffold_221_3
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

853..1182
DNA (330bp) protein (110aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
13_1_40cm_2_scaffold_221_4
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

1217..1873
DNA (657bp) protein (219aa)
hypothetical protein id=14628323 bin=bin8_Chloro species=Verrucosispora maris genus=Verrucosispora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein Tax=CSP1_4_Chloroflexi
hypothetical protein
13_1_40cm_2_scaffold_221_5
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

2163..2534
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037C45EA
hypothetical protein; K09008 hypothetical protein Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
hypothetical protein
13_1_40cm_2_scaffold_221_6
unknown

Not on your lists

2631..2837
DNA (207bp) protein (69aa)

This feature has no annotations

13_1_40cm_2_scaffold_221_7
unknown

Not on your lists

3013..3273
DNA (261bp) protein (87aa)

This feature has no annotations

13_1_40cm_2_scaffold_221_8
unknown

Not on your lists

comp(3471..3680)
DNA (210bp) protein (70aa)

This feature has no annotations

13_1_40cm_2_scaffold_221_9
unknown

Not on your lists

comp(4006..4179)
DNA (174bp) protein (58aa)

This feature has no annotations

13_1_40cm_2_scaffold_221_10
unknown

Not on your lists

comp(4227..4445)
DNA (219bp) protein (73aa)

This feature has no annotations

13_1_40cm_2_scaffold_221_11
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(4891..5202)
DNA (312bp) protein (104aa)
hypothetical protein id=14627895 bin=bin7_NC10_sister species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
hypothetical protein Tax=CSP1_6_Rokubacteria
GYD family protein
13_1_40cm_2_scaffold_221_12
unknown

Not on your lists

comp(5207..5494)
DNA (288bp) protein (96aa)

This feature has no annotations

13_1_40cm_2_scaffold_221_13
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

5534..5728
DNA (195bp) protein (65aa)
RNA polymerase sigma factor SigA n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EGR1_AMICL
RpoD subfamily RNA polymerase sigma-70 subunit
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium
13_1_40cm_2_scaffold_221_14
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

5901..8393
DNA (2493bp) protein (831aa)
ClpC ATPase; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC id=14630136 bin=bin8_Chloro species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
ClpC ATPase; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC Tax=CSP1_4_Chloroflexi
ATPase AAA
13_1_40cm_2_scaffold_221_15
Dictyoglomus turgidum, Dictyoglomus, Dictyoglomales, Dictyoglomia, Dictyoglomi, Bacteria

Not on your lists

8423..8707
DNA (285bp) protein (95aa)
SpoVS n=2 Tax=Dictyoglomus RepID=B5YDA7_DICT6
SpoVS
Stage V sporulation protein S {ECO:0000313|EMBL:ACK42081.1}; TaxID=515635 species="Bacteria; Dictyoglomi; Dictyoglomales; Dictyoglomaceae; Dictyoglomus.;" source="Dictyoglomus turgidum (strain Z-1310
13_1_40cm_2_scaffold_221_16
unknown

Not on your lists

8738..8890
DNA (153bp) protein (51aa)

This feature has no annotations

13_1_40cm_2_scaffold_221_17
unknown

Not on your lists

comp(9441..9629)
DNA (189bp) protein (63aa)

This feature has no annotations

13_1_40cm_2_scaffold_221_18
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

9884..10339
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Thermus islandicus RepID=UPI0003B4B7FB
hypothetical protein
hypothetical protein Tax=RBG_16_RIF_CHLX_72_14_curated
13_1_40cm_2_scaffold_221_19
Arthrobacter crystallopoietes, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10603..10839
DNA (237bp) protein (79aa)
hypothetical protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI000382362B
Uncharacterized protein {ECO:0000313|EMBL:EMY32334.1}; TaxID=1246476 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter crystallopoietes BAB-32.;"
hypothetical protein
13_1_40cm_2_scaffold_221_20
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10854..11357
DNA (504bp) protein (168aa)
Putative uncharacterized protein n=1 Tax=Frankia sp. (strain EAN1pec) RepID=A8L383_FRASN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABW14712.1}; Flags: Precursor;; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
13_1_40cm_2_scaffold_221_21
unknown

Not on your lists

comp(11424..11648)
DNA (225bp) protein (75aa)

This feature has no annotations

13_1_40cm_2_scaffold_221_22

Not on your lists

11681..12682
DNA (1002bp) protein (334aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037A7CA9
Uncharacterized protein {ECO:0000313|EMBL:KKM89265.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_1_40cm_2_scaffold_221_23
Arthrobacter siccitolerans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12757..13572
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Arthrobacter crystallopoietes BAB-32 RepID=N1V1S5_9MICC
Putative membrane protein {ECO:0000313|EMBL:CCQ45900.1}; TaxID=861266 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter siccitolerans.;"
hypothetical protein
13_1_40cm_2_scaffold_221_24
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13847..15940)
DNA (2094bp) protein (698aa)
Glycogen operon protein GlgX homolog {ECO:0000256|SAAS:SAAS00046872}; EC=3.2.1.- {ECO:0000256|SAAS:SAAS00055489};; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporac
Glycogen debranching enzyme GlgX n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1AC83_THECD
glycogen debranching enzyme GlgX
13_1_40cm_2_scaffold_221_25
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(15933..17564)
DNA (1632bp) protein (544aa)
treZ_[H]; Malto-oligosyltrehalose trehalohydrolase (EC:3.2.1.141) Tax=GWA2_Rokubacteria_70_23_curated
treZ_[H]; Malto-oligosyltrehalose trehalohydrolase (EC:3.2.1.141)
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI000380CF03 rbh
13_1_40cm_2_scaffold_221_26
Desulfotignum phosphitoxidans, Desulfotignum, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17561..20044)
DNA (2484bp) protein (828aa)
(1,4)-alpha-D-glucan 1-alpha-D-glucosylmutase GlgY {ECO:0000313|EMBL:EMS80364.1}; EC=5.4.99.15 {ECO:0000313|EMBL:EMS80364.1};; TaxID=1286635 species="Bacteria; Proteobacteria; Deltaproteobacteria; Des
malto-oligosyltrehalose synthase (EC:5.4.99.15)
(1,4)-alpha-D-glucan 1-alpha-D-glucosylmutase GlgY n=1 Tax=Desulfotignum phosphitoxidans DSM 13687 RepID=S0G494_9DELT rbh
13_1_40cm_2_scaffold_221_27
unknown

Not on your lists

20132..20524
DNA (393bp) protein (131aa)

This feature has no annotations

13_1_40cm_2_scaffold_221_28
unknown

Not on your lists

20539..21447
DNA (909bp) protein (303aa)

This feature has no annotations

13_1_40cm_2_scaffold_221_29
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

21444..23042
DNA (1599bp) protein (533aa)
alpha,alpha-trehalose-phosphate synthase (UDP-forming) (EC:2.4.1.15)
Alpha,alpha-trehalose-phosphate synthase (UDP-forming) {ECO:0000313|EMBL:ADB54309.1}; EC=2.4.1.15 {ECO:0000313|EMBL:ADB54309.1};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solir
Alpha,alpha-trehalose-phosphate synthase (UDP-forming) n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F3T4_CONWI
13_1_40cm_2_scaffold_221_30
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(23363..24592)
DNA (1230bp) protein (410aa)
Major facilitator superfamily MFS_1 n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MF82_RHOM4
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACY49338.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodo
Displaying items 1-30 of 36 in total

View Taxonomy