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13_1_40cm_2_scaffold_2446_13

Organism: 13_1_40CM_2_Actinobacteria_65_8

partial RP 18 / 55 MC: 2 BSCG 21 / 51 MC: 1 ASCG 6 / 38
Location: 9216..9719

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XE38_NAKMY similarity UNIREF
DB: UNIREF100
  • Identity: 51.9
  • Coverage: 162.0
  • Bit_score: 141
  • Evalue 7.70e-31
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 51.9
  • Coverage: 162.0
  • Bit_score: 141
  • Evalue 2.20e-31
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACV79741.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multi similarity UNIPROT
DB: UniProtKB
  • Identity: 51.9
  • Coverage: 162.0
  • Bit_score: 141
  • Evalue 1.10e-30

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Taxonomy

Nakamurella multipartita → Nakamurella → Nakamurellales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 504
GTGAAATCCCGCGATGAGGCGTTCGAAGCGCTGTTCAAAAGTGAATATGCGCGCGTTGCCGGCATTGCCAATCGCGTGCTGGCGGACTCGCATGAGGCTGAGGACGTGGCGCAGGAGGTCTTCATCAACTTCCACCGCCTGCACTCGGCCAACGCGCAGTTTGCACCCGCGTGGCTACACCGCGCCGCGGCGCACACGGCGCTGAACCGCCTTCGGGGCCGTCGCCGGCGCGAGAAGCGAGAGCTGGCACAGGCGCCAGGCGAAGCCGAGCGCACCGTTGACCCCCAGCGGATGCTCGAGGTCAACGAAGACCGGCGACTGGTGCGAGCCGCGCTCGCCCGGTTGGCGCCAAAACCCGCAGCCGTGCTCGTCTTACGCGCCAGCGGCCTCAGCTACGCCGAGGTCGGGCAGGCGCTCGGAGTTGGAACTGGACAGATCGGAACCATGTTGAGGCGCGCAGAAGCAGCCCTGCGCAAGGAGGTCACCCGTGGCACATCTCTCTGA
PROTEIN sequence
Length: 168
VKSRDEAFEALFKSEYARVAGIANRVLADSHEAEDVAQEVFINFHRLHSANAQFAPAWLHRAAAHTALNRLRGRRRREKRELAQAPGEAERTVDPQRMLEVNEDRRLVRAALARLAPKPAAVLVLRASGLSYAEVGQALGVGTGQIGTMLRRAEAALRKEVTRGTSL*