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13_1_40cm_2_scaffold_2446

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_2446_1
Paenibacillus sabinae, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2..730)
DNA (729bp) protein (243aa)
X-Pro dipeptidase n=1 Tax=Bacillus methanolicus MGA3 RepID=I3ECI4_BACMT
Xaa-Pro dipeptidase (X-Pro dipeptidase)
Xaa-Pro dipeptidase (X-Pro dipeptidase) {ECO:0000313|EMBL:AHV96215.1}; TaxID=1268072 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sabina
13_1_40cm_2_scaffold_2446_2
RIFOXYD12_FULL_Chloroflexi_57_15_curated, Chloroflexi, Bacteria

Not on your lists

comp(705..1169)
DNA (465bp) protein (155aa)
transcription elongation factor GreA n=1 Tax=Kurthia sp. JC8E RepID=UPI0002894693
greA; transcription elongation factor GreA; K03624 transcription elongation factor GreA Tax=RIFOXYD12_FULL_Chloroflexi_57_15_curated
greA; transcription elongation factor GreA
13_1_40cm_2_scaffold_2446_3
unknown

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1230..1667
DNA (438bp) protein (146aa)

This feature has no annotations

13_1_40cm_2_scaffold_2446_4
unknown

Not on your lists

comp(1664..2494)
DNA (831bp) protein (277aa)

This feature has no annotations

13_1_40cm_2_scaffold_2446_5
unknown

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comp(2516..3694)
DNA (1179bp) protein (393aa)

This feature has no annotations

13_1_40cm_2_scaffold_2446_6
RBG_13_Chloroflexi_53_26_curated, Chloroflexi, Bacteria

Not on your lists

comp(3691..4284)
DNA (594bp) protein (198aa)
RNA polymerase sigma-70 factor, ECF subfamily n=3 Tax=Dehalococcoides mccartyi RepID=M1QWM6_9CHLR
ECF subfamily RNA polymerase, sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_13_Chloroflexi_53_26_curated
RNA polymerase sigma-70 factor, ECF subfamily
13_1_40cm_2_scaffold_2446_7
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4477..5121)
DNA (645bp) protein (215aa)
glycerophosphoryl diester phosphodiesterase; K01126 glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] Tax=RBG_16_Desulfobacca_60_12_curated
glycerophosphodiester phosphodiesterase id=14632911 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin9_gal15 organism_group=GAL15
glycerophosphodiester phosphodiesterase
13_1_40cm_2_scaffold_2446_8
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

5339..6685
DNA (1347bp) protein (449aa)
magnesium chelatase subunit ChlI; K03405 magnesium chelatase subunit I [EC:6.6.1.1] Tax=RBG_16_Chloroflexi_68_14_curated
Magnesium chelatase subunit ChlI id=2312847 bin=GWA2_Methylomirabilis_73_35 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Mg-chelatase subunit ChlI-like protein
13_1_40cm_2_scaffold_2446_9
unknown

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comp(6682..7059)
DNA (378bp) protein (126aa)

This feature has no annotations

13_1_40cm_2_scaffold_2446_10
unknown

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7523..8074
DNA (552bp) protein (184aa)

This feature has no annotations

13_1_40cm_2_scaffold_2446_11
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

8071..8637
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C2F3_SPHTD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ38420.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" sourc
13_1_40cm_2_scaffold_2446_12
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

8643..9131
DNA (489bp) protein (163aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IS72_KORVE id=5225133 bin=16ft_combo_ws3_JS1 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein Tax=RBG_16_RIF_WS3X_71_46_curated
hypothetical protein
13_1_40cm_2_scaffold_2446_13
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9216..9719
DNA (504bp) protein (168aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XE38_NAKMY
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACV79741.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multi
13_1_40cm_2_scaffold_2446_14
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9703..10809
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RIP2_BLASD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCG02236.1}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strai
13_1_40cm_2_scaffold_2446_15
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

10858..11778
DNA (921bp) protein (307aa)
ABC-type transport system, ATPase component id=3327051 bin=GWC2_Chloroflexi_73_18 species=Deinococcus geothermalis genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good + rbh
ABC transporter; K01990 ABC-2 type transport system ATP-binding protein Tax=GWC2_RIF_CHLX_73_18_curated
ABC transporter
13_1_40cm_2_scaffold_2446_16
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

11778..12641
DNA (864bp) protein (288aa)
ABC-type transport system involved in multi-copper enzyme maturation, permease component id=3327047 bin=GWC2_Chloroflexi_73_18 species=Blastococcus saxobsidens genus=Blastococcus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
multi-copper enzyme maturation ABC transporter permease Tax=GWC2_RIF_CHLX_73_18_curated
multi-copper enzyme maturation ABC transporter permease
13_1_40cm_2_scaffold_2446_17
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12646..13017)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2PH65_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EWC61926.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongi
hypothetical protein
13_1_40cm_2_scaffold_2446_18
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(13038..14309)
DNA (1272bp) protein (424aa)
Glu/Leu/Phe/Val dehydrogenase; K00261 glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] Tax=RBG_16_RIF_CHLX_70_13_curated
Glutamate dehydrogenase id=4664613 bin=GWC2_Chloroflexi_73_18 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Glu/Leu/Phe/Val dehydrogenase
13_1_40cm_2_scaffold_2446_19
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(14306..15790)
DNA (1485bp) protein (495aa)
Thiamine pyrophosphate-requiring enzyme n=1 Tax=Patulibacter medicamentivorans RepID=H0EAR3_9ACTN
Thiamine pyrophosphate-requiring enzyme {ECO:0000313|EMBL:EHN09238.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source=
acetolactate synthase
Displaying 19 items

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