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13_1_40cm_2_scaffold_279_27

Organism: 13_1_40CM_2_Actinobacteria_65_8

partial RP 18 / 55 MC: 2 BSCG 21 / 51 MC: 1 ASCG 6 / 38
Location: 23201..23794

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B9Q6_STRRD similarity UNIREF
DB: UNIREF100
  • Identity: 51.6
  • Coverage: 182.0
  • Bit_score: 162
  • Evalue 5.00e-37
RNA polymerase sigma factor RpoE Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 56.6
  • Coverage: 182.0
  • Bit_score: 184
  • Evalue 1.30e-43
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 51.6
  • Coverage: 182.0
  • Bit_score: 162
  • Evalue 1.40e-37

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Taxonomy

RLO_RIF_CHLX_71_12 → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 594
ATGGAGGGCCGACCAACGGATGGCGAGCTGTTCTCACGCGCCCAGCGCGGAGATCAGGCCGCGTACGAGGAGATCGTGCGGCGCTACCAGGAGGTCGCTTTTCGGATGGCATACGTGATCACCGGCTCAGCGGCCGACGCCGAGGACGCCGCGCAGGAGGGTTTCGTGAAGGCGTATCGCGCACTGGCGACGTTCCGCACCGGGGCGGAACCGCGGCCATGGCTGCTGCGGATCGTCGCCAACGAGGCGCGCAACCGCGCCCGCTCGGCGGGCCGCCGCCACCAGCTCGAGCTGCGATTGGCGGAGCGCTTCCGCCCGGGGGATGCGGCCCCATCCCCCGAGGCGGCGGCCGTTGCATCCGAGGAACGCAGCCGGCTGCTCGGCTTCGTGAACGCCCTGAGCCAGGAGGACCGCGACGTGATTTCCAGTCGCTACTTCCTCGAGCTCAACGGCGAGGAGACCGCGGCCGCGCTTGGGATTCCCGAAGGCACCGTGAAATCGCGCCTGTCGCGTGCGCTGTCACGCTTACGGCTGAGAGTCGAGGAGGGCACCACCTGGAGTGGCCGCGGACGCCTGATCTCGCAGCCAGGGTAA
PROTEIN sequence
Length: 198
MEGRPTDGELFSRAQRGDQAAYEEIVRRYQEVAFRMAYVITGSAADAEDAAQEGFVKAYRALATFRTGAEPRPWLLRIVANEARNRARSAGRRHQLELRLAERFRPGDAAPSPEAAAVASEERSRLLGFVNALSQEDRDVISSRYFLELNGEETAAALGIPEGTVKSRLSRALSRLRLRVEEGTTWSGRGRLISQPG*