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13_1_40cm_2_scaffold_279

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_279_1
unknown

Not on your lists

comp(2..277)
DNA (276bp) protein (92aa)

This feature has no annotations

13_1_40cm_2_scaffold_279_2
unknown

Not on your lists

comp(727..1893)
DNA (1167bp) protein (389aa)

This feature has no annotations

13_1_40cm_2_scaffold_279_3
GWC2_Syntrophus_56_31_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2011..2295
DNA (285bp) protein (95aa)
hypothetical protein
hypothetical protein Tax=GWC2_Syntrophus_56_31_curated
Uncharacterized protein id=4418597 bin=GWC2_Syntrophus__56_31 species=Myxococcus stipitatus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
13_1_40cm_2_scaffold_279_4
Lyngbya confervoides, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

2329..2739
DNA (411bp) protein (137aa)
lyase n=1 Tax=Gillisia marina RepID=UPI00029A458D
Lyase {ECO:0000313|EMBL:KIF43707.1}; TaxID=1574623 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya confervoides BDU141951.;"
lyase
13_1_40cm_2_scaffold_279_5
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

2913..3458
DNA (546bp) protein (182aa)
hypothetical protein Tax=RBG_16_Chloroflexi_57_11_curated
13_1_40cm_2_scaffold_279_6
unknown

Not on your lists

comp(3333..3782)
DNA (450bp) protein (150aa)

This feature has no annotations

13_1_40cm_2_scaffold_279_7
RBG_16_Actinobacteria_70_17_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(3769..4485)
DNA (717bp) protein (239aa)
DNA-binding protein n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9UZF8_9ACTO
putative TetR-family transcriptional regulator Tax=RBG_16_Actinobacteria_70_17_curated
TetR family transcriptional regulator
13_1_40cm_2_scaffold_279_8
RBG_16_Actinobacteria_70_17_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

4598..4873
DNA (276bp) protein (92aa)
Tax=RBG_16_Actinobacteria_70_17_curated
13_1_40cm_2_scaffold_279_9
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

5072..5704
DNA (633bp) protein (211aa)
Tax=RBG_13_Chloroflexi_68_17_curated
13_1_40cm_2_scaffold_279_10
unknown

Not on your lists

5750..6208
DNA (459bp) protein (153aa)

This feature has no annotations

13_1_40cm_2_scaffold_279_11
Arthrobacter siccitolerans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6451..7185)
DNA (735bp) protein (245aa)
Uncharacterized protein {ECO:0000313|EMBL:CCQ44155.1}; TaxID=861266 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter siccitolerans.;"
13_1_40cm_2_scaffold_279_12
unknown

Not on your lists

comp(7478..8392)
DNA (915bp) protein (305aa)

This feature has no annotations

13_1_40cm_2_scaffold_279_13
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8428..10251
DNA (1824bp) protein (608aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VPG0_RHOPX rbh
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:ADU44820.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseu
13_1_40cm_2_scaffold_279_14
RBG_13_RIF03_48_7_curated, RIF3, Bacteria

Not on your lists

10655..13156
DNA (2502bp) protein (834aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00036A8108
similar to egg bindin receptor 1 precursor Tax=RBG_13_RIF03_48_7_curated
hypothetical protein
13_1_40cm_2_scaffold_279_15
Streptomyces violaceusniger, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13657..14502
DNA (846bp) protein (282aa)
2-nitropropane dioxygenase NPD n=1 Tax=Streptomyces violaceusniger Tu 4113 RepID=G2P7V2_STRVO
2-nitropropane dioxygenase
2-nitropropane dioxygenase NPD {ECO:0000313|EMBL:AEM85613.1}; TaxID=653045 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces violaceusniger T
13_1_40cm_2_scaffold_279_16
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14631..16211)
DNA (1581bp) protein (527aa)
SH3 type 3 domain protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BT69_9GAMM
SH3 type 3 domain protein {ECO:0000313|EMBL:EIJ34562.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 52
serine/threonine protein kinase
13_1_40cm_2_scaffold_279_17
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16850..18016
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XXS8_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP37304.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium c
13_1_40cm_2_scaffold_279_trna_2
unknown

Not on your lists

comp(18399..18471)
DNA (73bp)
transferRNA
13_1_40cm_2_scaffold_279_18
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(18606..18923)
DNA (318bp) protein (106aa)
UPI0003CFB68A related cluster n=1 Tax=unknown RepID=UPI0003CFB68A
hypothetical protein Tax=RBG_16_RIF_CHLX_72_14_curated
hypothetical protein
13_1_40cm_2_scaffold_279_19
Cryobacterium roopkundense, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19026..19616)
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Microbacterium paraoxydans RepID=UPI0003663DEB
Uncharacterized protein {ECO:0000313|EMBL:KGJ72779.1}; TaxID=1001240 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium roopkundense.;"
hypothetical protein
13_1_40cm_2_scaffold_279_20
unknown

Not on your lists

comp(19642..19905)
DNA (264bp) protein (88aa)

This feature has no annotations

13_1_40cm_2_scaffold_279_21
unknown

Not on your lists

comp(19902..20258)
DNA (357bp) protein (119aa)

This feature has no annotations

13_1_40cm_2_scaffold_279_22
unknown

Not on your lists

20355..21230
DNA (876bp) protein (292aa)

This feature has no annotations

13_1_40cm_2_scaffold_279_trna_1
unknown

Not on your lists

comp(20359..20433)
DNA (75bp)
transferRNA
13_1_40cm_2_scaffold_279_23
Desulfurivibrio alkaliphilus, Desulfurivibrio, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21237..21797
DNA (561bp) protein (187aa)
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:ADH87224.1}; EC=2.4.2.8 {ECO:0000313|EMBL:ADH87224.1};; TaxID=589865 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales;
Hypoxanthine phosphoribosyltransferase n=1 Tax=Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2) RepID=D6Z0W4_DESAT
13_1_40cm_2_scaffold_279_24
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21794..22561)
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI00036CA58A
Uncharacterized protein {ECO:0000313|EMBL:ETX00904.1}; Flags: Fragment;; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheone
methylated-DNA-(protein)-cysteine S-methyltransferase
13_1_40cm_2_scaffold_279_25
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22542..23057)
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Streptomyces sp. CcalMP-8W RepID=UPI00037B3F18
Uncharacterized protein {ECO:0000313|EMBL:ETX00910.1}; Flags: Fragment;; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheone
putative RNA polymerase ECF-subfamily sigma factor
13_1_40cm_2_scaffold_279_26
unknown

Not on your lists

comp(23077..23169)
DNA (93bp) protein (31aa)

This feature has no annotations

13_1_40cm_2_scaffold_279_27
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

23201..23794
DNA (594bp) protein (198aa)
RNA polymerase sigma factor n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B9Q6_STRRD
RNA polymerase sigma factor RpoE Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
ECF subfamily RNA polymerase sigma-24 subunit
13_1_40cm_2_scaffold_279_28
unknown

Not on your lists

23872..24147
DNA (276bp) protein (92aa)

This feature has no annotations

Displaying 30 items

View Taxonomy