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13_1_40cm_2_scaffold_8649_1

Organism: 13_1_40CM_2_Actinobacteria_65_8

partial RP 18 / 55 MC: 2 BSCG 21 / 51 MC: 1 ASCG 6 / 38
Location: comp(37..1761)

Top 3 Functional Annotations

Value Algorithm Source
General secretory pathway protein E id=4832831 bin=GWC2_Chloroflexi_73_18 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 49.3
  • Coverage: 578.0
  • Bit_score: 536
  • Evalue 3.70e-149
  • rbh
type II secretion system protein E; K02652 type IV pilus assembly protein PilB Tax=GWC2_RIF_CHLX_73_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 49.3
  • Coverage: 578.0
  • Bit_score: 536
  • Evalue 5.20e-149
type IV pilus assembly protein PilB similarity KEGG
DB: KEGG
  • Identity: 47.8
  • Coverage: 569.0
  • Bit_score: 504
  • Evalue 3.40e-140

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Taxonomy

GWC2_RIF_CHLX_73_18_curated → RIF-CHLX → Bacteria

Sequences

DNA sequence
Length: 1725
ATGGCTTCGAACCCGGTGCAGGCGACGCTGCCGGCCCAGGAGGGTGCCCCACGTCTCGGTGAGCGGCTGCTCGCCCTTCGGCTGATCAATGAAGGTCAGCTTCGGCGCGCCCTCGACCTCCAGCTGCAAAGCTCGCGAGTCTTGGGAGCGGTGCTTCTTGAGCTCGGAATCCTCGACGAGGATCGGCTAACGTCGGTTCTAGGCGAACACCTCGAGATTCCGATCGCCGATCTGCGACGGGAGGCTGTCGACCCCGAGGCGGCCCAGCTGGTGCCTGCGGACTTCGCGCGCAAGCACGTGCTGCTGCCGATCCGGAACAAAGATGGGGAGCTGGCCGTCGCCATGGCCGACCCCCGCAACCTGCACCTCGTCAACGACCTGCGCCTCATCACCGGCCTCGTGATCGCTCCCTACCTCGCCGGACGATCGGACATCCTGGCCAACCTGAGTCGGATACACAGCATGCGGCCGAGAATCCACGAGGCCGCGCTCTCGCTGGAGGAGAGCAGGCCGCAGATCGGCGCCACGCGGTCGATCGTCTTCGAGCTCTCGAACGTCACCGCCACCTCGCCCGCTGTCGAGATCGTCAACATGCTGATCACGCAGGGGCTTCGTGACCGGGCGTCCGACATCCACGTCGAACCCCAGAAGGACTACCTCCGCATCCGGTTCCGGATTGACGGCGTGCTGCAGGACGTCGCCCATCTGCCCACGTCCACCGGGGCGGCGCTGGCGTCTCGAATCAAGATCATGGCCGACATGAACATCGTCGAGCGGCGTCGCGCGCAGGACGGTCAGATCAGCCTCACCGTGGACAACCGCGATCTCGACGTTCGCGTGGCCACGATCGAGACGATCTGGGGCGAAAAGCTGGTGCTCAGGCTGCTCGACCGCGGGCGATCGCTCATCACCCTGCAGCAGCTGGGCTTCTCGCGGAGCGCTTATGGGCGATTCCACACCATGCTGCACTCGCCGTACGGAATGATCATCGTGTCCGGACCGACCGGCAGCGGCAAGACGACCAGCCTCTACGCCGCCATCCACGAGCTCGACCAGCAGGTCCGCAACATCATGACCATCGAAGATCCGGTCGAGTACACCTTCGAAAACATCAACCAGAGCCAGATCAACAAGCTGGCAGACATCAGCTTCGCCAACGGGCTGCGGGCGATCCTGCGCCAGGATCCGGACATCATCCTGGTGGGCGAGATCCGCGACCGAGAGACCGCTGAGATCGCCGTCCAGTCGGCGCTGACCGGCCACCTCGTGCTCTCGTCACTGCATGCCACCGACGGCGCCGGCGCGCTGCTTCGGTTCATCGACATGGGGATCGAGGGCTTCCTGATCGCGTCTTCGGTGATCGCGATCGTGGCGCAGCGCCTGGTGCGAAAGGTGTGTGACGGCTGCAAGACGGCACACGCGCCGACGGTCGAGGAGGCCGAGTTCGCCGCTTCACTTGGCCGCCCCGTGCCGGCGCAGCTCTACCACGGCCAGGGGTGCGCGCGGTGCAACCACACCGGCTATTACGACCGCATCGGGGTGTTCGAGGTCCTAACGATGACCGACGAGCTGAAGCGGCTCGTGATCGCCCGAGCGGGTCACCGCGAGATCATGGCCGCCGCCGTGCAGGGTGGGGTGGTCCCCCTCCGGGTGGATGCGTGGGAGAAGGCGGCGGCCGGTGTGACGACGGTTACCGAAGTTTTGCGCAGCGTCTACATCCTGTAA
PROTEIN sequence
Length: 575
MASNPVQATLPAQEGAPRLGERLLALRLINEGQLRRALDLQLQSSRVLGAVLLELGILDEDRLTSVLGEHLEIPIADLRREAVDPEAAQLVPADFARKHVLLPIRNKDGELAVAMADPRNLHLVNDLRLITGLVIAPYLAGRSDILANLSRIHSMRPRIHEAALSLEESRPQIGATRSIVFELSNVTATSPAVEIVNMLITQGLRDRASDIHVEPQKDYLRIRFRIDGVLQDVAHLPTSTGAALASRIKIMADMNIVERRRAQDGQISLTVDNRDLDVRVATIETIWGEKLVLRLLDRGRSLITLQQLGFSRSAYGRFHTMLHSPYGMIIVSGPTGSGKTTSLYAAIHELDQQVRNIMTIEDPVEYTFENINQSQINKLADISFANGLRAILRQDPDIILVGEIRDRETAEIAVQSALTGHLVLSSLHATDGAGALLRFIDMGIEGFLIASSVIAIVAQRLVRKVCDGCKTAHAPTVEEAEFAASLGRPVPAQLYHGQGCARCNHTGYYDRIGVFEVLTMTDELKRLVIARAGHREIMAAAVQGGVVPLRVDAWEKAAAGVTTVTEVLRSVYIL*