ggKbase home page

13_1_40cm_2_scaffold_8649

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_8649_1
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(37..1761)
DNA (1725bp) protein (575aa)
General secretory pathway protein E id=4832831 bin=GWC2_Chloroflexi_73_18 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good + rbh
type II secretion system protein E; K02652 type IV pilus assembly protein PilB Tax=GWC2_RIF_CHLX_73_18_curated
type IV pilus assembly protein PilB
13_1_40cm_2_scaffold_8649_2
Lyngbya sp. PCC 8106, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(1855..2556)
DNA (702bp) protein (234aa)
LuxR family two component transcriptional regulator id=1246929 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
Two-component response regulator {ECO:0000313|EMBL:EAW35802.1}; TaxID=313612 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya sp. (strain PCC 8106)
two component transcriptional regulator, LuxR family
13_1_40cm_2_scaffold_8649_3
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(2743..3429)
DNA (687bp) protein (229aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TM75_9CHLR
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:EFH86875.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
13_1_40cm_2_scaffold_8649_4
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3426..4028)
DNA (603bp) protein (201aa)
Two-component system sensor kinase n=1 Tax=Streptomyces griseoflavus Tu4000 RepID=D9XR46_9ACTO
Histidine kinase {ECO:0000313|EMBL:KEA58522.1}; TaxID=95486 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" sour
histidine kinase family protein
13_1_40cm_2_scaffold_8649_5
Rhodococcus sp. AW25M09, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4319..4846)
DNA (528bp) protein (176aa)
Putative NarL family two-component response regulator n=1 Tax=Rhodococcus sp. AW25M09 RepID=L8DHR4_9NOCA
Putative NarL family two-component response regulator {ECO:0000313|EMBL:CCQ16455.1}; TaxID=1268303 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcu
DNA-binding response regulator, LuxR
13_1_40cm_2_scaffold_8649_6
unknown

Not on your lists

5186..5527
DNA (342bp) protein (114aa)

This feature has no annotations

13_1_40cm_2_scaffold_8649_7
unknown

Not on your lists

comp(5534..5797)
DNA (264bp) protein (88aa)

This feature has no annotations

13_1_40cm_2_scaffold_8649_8
unknown

Not on your lists

6077..6592
DNA (516bp) protein (172aa)

This feature has no annotations

13_1_40cm_2_scaffold_8649_9
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(6603..8225)
DNA (1623bp) protein (541aa)
Uncharacterized protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CD14_THET1
exporter of polyketide antibiotics-like protein; K09686 antibiotic transport system permease protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
13_1_40cm_2_scaffold_8649_10
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(8227..9156)
DNA (930bp) protein (310aa)
ABC transporter related protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TEV8_9CHLR
ABC transporter; K09687 antibiotic transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
ABC transporter
13_1_40cm_2_scaffold_8649_11
Streptomyces griseus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9153..9611)
DNA (459bp) protein (153aa)
ArsR family transcriptional regulator n=1 Tax=Streptomyces globisporus RepID=UPI00029B12EA
Uncharacterized protein {ECO:0000313|EMBL:KIX34217.1}; TaxID=1911 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseus.;"
hypothetical protein
13_1_40cm_2_scaffold_8649_12
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9646..11976)
DNA (2331bp) protein (777aa)
Uncharacterized protein n=1 Tax=Micromonospora sp. (strain L5) RepID=E8S4Q0_MICSL rbh
hypothetical protein
AttF component of AttEFGH ABC transport system / AttG component of AttEFGH ABC transport system {ECO:0000313|EMBL:CEL23018.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudo
13_1_40cm_2_scaffold_8649_13
Streptomyces lydicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11973..12758)
DNA (786bp) protein (262aa)
ABC transporter n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI000262571E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJT66010.1}; TaxID=1403539 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces lydicus A02.;"
13_1_40cm_2_scaffold_8649_14
unknown

Not on your lists

comp(12701..12946)
DNA (246bp) protein (82aa)

This feature has no annotations

13_1_40cm_2_scaffold_8649_15
Propionibacterium sp. KPL1847, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12943..13188)
DNA (246bp) protein (82aa)
Transcriptional regulator, PadR family n=1 Tax=Propionibacterium acnes SK182B-JCVI RepID=F9NVQ3_PROAA
PadR family transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:ERS33947.1}; TaxID=1203574 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium sp. KP
13_1_40cm_2_scaffold_8649_16
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13212..13550
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LS07_ACIC1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABK52217.1}; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC
Displaying 16 items

View Taxonomy