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13_1_40cm_2_scaffold_10525

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_10525_1
Geobacter bemidjiensis, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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1..687
DNA (687bp) protein (229aa)
Flagellar basal body stator protein MotB n=1 Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5EDW5_GEOBB
motB; chemotaxis protein MotB
Flagellar basal body stator protein MotB {ECO:0000313|EMBL:ACH40743.1}; TaxID=404380 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Ge
13_1_40cm_2_scaffold_10525_2
Chromobacterium violaceum, Chromobacterium, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(853..1404)
DNA (552bp) protein (184aa)
Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) RepID=Q7NT79_CHRVO
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AAQ60848.1}; TaxID=243365 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Chromobacterium.;" source="Chromob
13_1_40cm_2_scaffold_10525_3
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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comp(1434..2483)
DNA (1050bp) protein (350aa)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein id=12557553 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
13_1_40cm_2_scaffold_10525_4
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2597..5449)
DNA (2853bp) protein (951aa)
glpC; D-lactate dehydrogenase (cytochrome) Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Glr3436 protein id=3830908 bin=GWF2_Methylomirabilis_70_14 species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
glpC; D-lactate dehydrogenase (cytochrome)
13_1_40cm_2_scaffold_10525_5
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

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comp(5570..5770)
DNA (201bp) protein (67aa)
30S ribosomal protein S21 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=RS21_KORVE
rpsU; 30S ribosomal protein S21; K02970 small subunit ribosomal protein S21 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
30S ribosomal protein S21
13_1_40cm_2_scaffold_10525_6
unknown

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comp(6142..6393)
DNA (252bp) protein (84aa)

This feature has no annotations

13_1_40cm_2_scaffold_10525_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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6413..7438
DNA (1026bp) protein (342aa)
hypothetical protein n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B66BB6
ADP-heptose:LPS heptosyltransferase {ECO:0000313|EMBL:CDM65824.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
lipopolysaccharide heptosyltransferase
13_1_40cm_2_scaffold_10525_8
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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comp(7410..7709)
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035ED8D0
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
hypothetical protein
13_1_40cm_2_scaffold_10525_9
unknown

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7870..8118
DNA (249bp) protein (83aa)

This feature has no annotations

13_1_40cm_2_scaffold_10525_10

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8118..8690
DNA (573bp) protein (191aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q021G1_SOLUE
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AIA10580.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ECF subfamily RNA polymerase sigma-24 factor
13_1_40cm_2_scaffold_10525_11
unknown

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8817..9428
DNA (612bp) protein (204aa)

This feature has no annotations

13_1_40cm_2_scaffold_10525_12
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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9573..10292
DNA (720bp) protein (240aa)
hypothetical protein
Tax=BJP_IG2157_Anaerolineales_55_23
Displaying 12 items

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