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13_1_40cm_2_scaffold_1407

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_1407_1
Candidatus Kuenenia stuttgartiensis, Candidatus Kuenenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(3..380)
DNA (378bp) protein (126aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5
thiamine-phosphate diphosphorylase (EC:2.5.1.3)
Thiamine-phosphate synthase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PZK7_9BACT
13_1_40cm_2_scaffold_1407_2
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(377..643)
DNA (267bp) protein (89aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024M3_SOLUE
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
hypothetical protein
13_1_40cm_2_scaffold_1407_3
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists


comp(714..1064)
DNA (351bp) protein (117aa)
50S ribosomal protein L19 n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SIU3_9BACT
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=171953 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bac
50S ribosomal protein L19
13_1_40cm_2_scaffold_1407_4
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

comp(1076..1768)
DNA (693bp) protein (231aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltrans
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SIU4_9BACT
tRNA (Guanine37-N(1)-) methyltransferase
13_1_40cm_2_scaffold_1407_5
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(1765..2169)
DNA (405bp) protein (135aa)
Ribosome maturation factor RimM n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=RIMM_SYNFM
16S rRNA-processing protein RimM; K02860 16S rRNA processing protein RimM Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
16S rRNA processing protein RimM
13_1_40cm_2_scaffold_1407_6
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(2302..2532)
DNA (231bp) protein (77aa)
UPF0109 protein Acid_2571 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024L6_SOLUE
RNA-binding protein; K06960 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
RNA-binding protein
13_1_40cm_2_scaffold_1407_7
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists


comp(2665..2913)
DNA (249bp) protein (83aa)
30S ribosomal protein S16 n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IHT3_9CHLR
30S ribosomal protein S16; K02959 small subunit ribosomal protein S16 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
30S ribosomal protein S16p
13_1_40cm_2_scaffold_1407_8
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists


comp(2959..4302)
DNA (1344bp) protein (448aa)
Signal recognition particle protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024L4_SOLUE rbh
signal recognition particle subunit FFH/SRP54 (srp54)
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales
13_1_40cm_2_scaffold_1407_9
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(4320..5096)
DNA (777bp) protein (259aa)
metallophosphoesterase; K09769 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
metallophosphoesterase; K09769 hypothetical protein id=7201253 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
metallophosphoesterase
13_1_40cm_2_scaffold_1407_10
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5380..5658)
DNA (279bp) protein (93aa)
cell division protein ZapA; K09888 cell division protein ZapA Tax=RBG_13_Deltaproteobacteria_52_11_curated
13_1_40cm_2_scaffold_1407_11
unknown

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comp(5651..5884)
DNA (234bp) protein (78aa)

This feature has no annotations

13_1_40cm_2_scaffold_1407_12
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists


comp(5895..7910)
DNA (2016bp) protein (672aa)
phenylalanyl-tRNA synthetase beta subunit; K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
phenylalanyl-tRNA synthetase subunit beta, non-spirochete bacterial (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LG36_CHLTF
13_1_40cm_2_scaffold_1407_13
Bacillus selenatarsenatis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(7907..8947)
DNA (1041bp) protein (347aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-t
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=SYFA_GEODF
pheS; phenylalanyl-tRNA synthetase subunit alpha
13_1_40cm_2_scaffold_1407_14
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists


comp(8978..9343)
DNA (366bp) protein (122aa)
50S ribosomal protein L20 n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=RL20_THERP
rplT; 50S ribosomal protein L20
50S ribosomal protein L20 {ECO:0000255|HAMAP-Rule:MF_00382}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (stra
13_1_40cm_2_scaffold_1407_15
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(9554..10063)
DNA (510bp) protein (170aa)
Translation initiation factor IF-3 n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ITT2_KORVE
translation initiation factor 3; K02520 translation initiation factor IF-3 Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
translation initiation factor 3
13_1_40cm_2_scaffold_1407_16
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

10492..12273
DNA (1782bp) protein (594aa)
thrS; threonyl-tRNA synthetase (EC:6.1.1.3); K01868 threonyl-tRNA synthetase [EC:6.1.1.3] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
thrS; threonyl-tRNA synthetase; K01868 threonyl-tRNA synthetase [EC:6.1.1.3] id=12557837 bin=CNBR_ACIDO species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
thrS; threonyl-tRNA synthetase (EC:6.1.1.3)
13_1_40cm_2_scaffold_1407_17
unknown

Not on your lists

comp(12288..12536)
DNA (249bp) protein (83aa)

This feature has no annotations

13_1_40cm_2_scaffold_1407_18
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

13400..14323
DNA (924bp) protein (308aa)
outer membrane efflux protein id=14425848 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
outer membrane efflux protein Tax=CSP1_2_Dadabacteria
outer membrane efflux protein
Displaying 18 items

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