ggKbase home page

13_1_40cm_2_scaffold_14736

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_14736_1
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..291)
DNA (291bp) protein (97aa)
Manganese and iron superoxide dismutase n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V9D0_SPHWW
manganese and iron superoxide dismutase
Manganese and iron superoxide dismutase {ECO:0000313|EMBL:ABQ68896.1}; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphi
13_1_40cm_2_scaffold_14736_2
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(305..742)
DNA (438bp) protein (146aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
ChrB protein id=4663781 bin=GWF2_Methylomirabilis_70_14 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_2_scaffold_14736_3
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(723..2150)
DNA (1428bp) protein (476aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XF72_9BACT
integral membrane sensor signal transduction histidine kinase
13_1_40cm_2_scaffold_14736_4
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(2147..2836)
DNA (690bp) protein (230aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XF71_9BACT
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:EEF61569.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdi
transcriptional regulator
13_1_40cm_2_scaffold_14736_5
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(2902..3681)
DNA (780bp) protein (260aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036EEA5F rbh
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ABJ82800.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
13_1_40cm_2_scaffold_14736_6
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3706..5535
DNA (1830bp) protein (610aa)
Glucose dehydrogenase n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YQ28_9BRAD rbh
polyvinyl-alcohol dehydrogenase Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
polyvinyl-alcohol dehydrogenase
13_1_40cm_2_scaffold_14736_7
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

5595..6875
DNA (1281bp) protein (427aa)
Trigger factor n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=TIG_KORVE
trigger factor; K03545 trigger factor Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
trigger factor
13_1_40cm_2_scaffold_14736_8
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

6926..7528
DNA (603bp) protein (201aa)
ATP-dependent Clp protease proteolytic subunit ClpP; K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=CLPP_KORVE
ATP-dependent Clp protease proteolytic subunit
13_1_40cm_2_scaffold_14736_9
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

7701..8933
DNA (1233bp) protein (411aa)
ATP-dependent Clp protease ATP-binding subunit ClpX; K03544 ATP-dependent Clp protease ATP-binding subunit ClpX Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
ATP-dependent Clp protease ATP-binding subunit ClpX; K03544 ATP-dependent Clp protease ATP-binding subunit ClpX id=12555810 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
clpX; ATP-dependent protease ATP-binding subunit ClpX
13_1_40cm_2_scaffold_14736_10
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

8967..11384
DNA (2418bp) protein (806aa)
Lon-A peptidase (EC:3.4.21.53); K01338 ATP-dependent Lon protease [EC:3.4.21.53] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
Lon protease n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRE0_KORVE
Lon-A peptidase
13_1_40cm_2_scaffold_14736_11
CSP1_5_NC10, NC10, Bacteria

Not on your lists

11477..12058
DNA (582bp) protein (194aa)
engB; ribosome biogenesis GTP-binding protein YsxC; K03978 GTP-binding protein id=14428817 bin=bin3_NC10 species=Desmospora sp. 8437 genus=Desmospora taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin3_NC10 organism_group=NC10
engB; ribosome biogenesis GTP-binding protein YsxC; K03978 GTP-binding protein Tax=CSP1_5_NC10
GTP-binding protein
13_1_40cm_2_scaffold_14736_12
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

12055..13365
DNA (1311bp) protein (437aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=234267 specie
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000381993F
rho; transcription termination factor Rho
13_1_40cm_2_scaffold_14736_13
Gordonia polyisoprenivorans, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13859..15841
DNA (1983bp) protein (661aa)
glycosyl transferase n=1 Tax=Gordonia polyisoprenivorans RepID=UPI000380579F
putative glycosyl transferase
Putative glycosyl transferase {ECO:0000313|EMBL:AFA74655.1}; TaxID=1112204 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia polyisoprenivorans (strain D
13_1_40cm_2_scaffold_14736_14
CG_Delta_01, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15845..16825)
DNA (981bp) protein (327aa)
add; adenosine deaminase (Adenosine aminohydrolase) (EC:3.5.4.4) Tax=CG_Delta_01
add; adenosine deaminase (EC:3.5.4.4)
adenine deaminase n=1 Tax=SAR324 cluster bacterium SCGC AAA001-C10 RepID=UPI000289F3BE
13_1_40cm_2_scaffold_14736_15
unknown

Not on your lists

16833..17174
DNA (342bp) protein (114aa)

This feature has no annotations

13_1_40cm_2_scaffold_14736_16
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

17191..17403
DNA (213bp) protein (71aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
Displaying 16 items

View Taxonomy