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13_1_40cm_2_scaffold_1998

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_1998_1
R_Acidobacteria_60_20, Acidobacteria, Bacteria

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1..432
DNA (432bp) protein (144aa)
hypothetical protein n=2 Tax=Bacteria RepID=UPI00035F6B22
NADH dehydrogenase I subunit M; K05568 multicomponent Na+:H+ antiporter subunit D Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
NADH dehydrogenase I subunit M
13_1_40cm_2_scaffold_1998_2
R_Acidobacteria_60_20, Acidobacteria, Bacteria

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429..1898
DNA (1470bp) protein (490aa)
proton-translocating NADH-quinone oxidoreductase subunit M (EC:1.6.99.5); K00342 NADH-quinone oxidoreductase subunit M [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
nuoM; NADH-quinone oxidoreductase membrane subunit M (EC:1.6.99.5)
hypothetical protein n=2 Tax=Bacteria RepID=UPI00036E574F
13_1_40cm_2_scaffold_1998_3
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

1895..3295
DNA (1401bp) protein (467aa)
proton-translocating NADH-quinone oxidoreductase subunit N (EC:1.6.99.5); K00343 NADH-quinone oxidoreductase subunit N [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
nuoN2; NADH-quinone oxidoreductase subunit N 2 (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit N id=3426635 bin=GWF2_Nitrospirae_44_13 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
13_1_40cm_2_scaffold_1998_4
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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3460..3846
DNA (387bp) protein (129aa)
nicotinamide nucleotide transhydrogenase subunit alpha; K00324 NAD(P) transhydrogenase subunit alpha [EC:1.6.1.2] Tax=RBG_16_Ignavibacteria_34_14_curated
Nicotinamide nucleotide transhydrogenase, subunit alpha id=4913309 bin=GWA2_Ignavibacteria_55_11 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
nicotinamide nucleotide transhydrogenase subunit alpha
13_1_40cm_2_scaffold_1998_5
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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3846..5249
DNA (1404bp) protein (468aa)
NAD(P) transhydrogenase, beta subunit; K00325 NAD(P) transhydrogenase subunit beta [EC:1.6.1.2] Tax=RBG_16_Acidobacteria_70_10_curated
NAD(P) transhydrogenase subunit beta id=4381502 bin=GWC2_Ignavibacteria_56_12 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
NAD(P) transhydrogenase subunit beta
13_1_40cm_2_scaffold_1998_6
Candidatus Acetothermus autotrophicum, Candidatus Acetothermum, Acetothermia, Bacteria

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comp(5291..6397)
DNA (1107bp) protein (369aa)
NAD(P)(+) transhydrogenase (AB-specific) (EC:1.6.1.2)
NAD(P) transhydrogenase subunit alpha n=1 Tax=Anabaena sp. PCC 7108 RepID=UPI000349A8FA
NAD(P) transhydrogenase subunit alpha {ECO:0000313|EMBL:BAL59350.1}; TaxID=1446466 species="Bacteria; Acetothermia; Candidatus Acetothermum.;" source="Candidatus Acetothermus autotrophicum.;"
13_1_40cm_2_scaffold_1998_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(6515..6931)
DNA (417bp) protein (139aa)
id=3914667 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
id=3914667 Tax=GWC2_Rokubacteria_70_16_curated
13_1_40cm_2_scaffold_1998_8
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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comp(7271..8257)
DNA (987bp) protein (329aa)
acetamidase n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B76DFA rbh
putative hydrolase Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
acetamidase/formamidase
13_1_40cm_2_scaffold_1998_9
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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8522..8890
DNA (369bp) protein (123aa)
PilT protein domain protein n=2 Tax=Chloroflexus RepID=A9WFW2_CHLAA
PilT protein domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PilT domain-containing protein
13_1_40cm_2_scaffold_1998_10
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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9252..9614
DNA (363bp) protein (121aa)
NADH-ubiquinone/plastoquinone oxidoreductase chain 3; K00330 NADH-quinone oxidoreductase subunit A [EC:1.6.5.3] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
NADH:ubiquinone oxidoreductase subunit A n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B54E6D
nuoA-1; NADH dehydrogenase I subunit A
13_1_40cm_2_scaffold_1998_11
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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9718..10116
DNA (399bp) protein (133aa)
NADH dehydrogenase subunit B (EC:1.6.99.5); K00331 NADH-quinone oxidoreductase subunit B [EC:1.6.5.3] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
NADH dehydrogenase subunit B (EC:1.6.99.3)
NADH-quinone oxidoreductase subunit B id=2999366 bin=GWA2_OP3_52_12 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
13_1_40cm_2_scaffold_1998_12
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

10113..10694
DNA (582bp) protein (194aa)
NADH (or F420H2) dehydrogenase subunit C (EC:1.6.5.3); K00332 NADH-quinone oxidoreductase subunit C [EC:1.6.5.3] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
nuoC1; NADH dehydrogenase (ubiquinone) (EC:1.6.5.3); K00332 NADH-quinone oxidoreductase subunit C [EC:1.6.5.3] id=14627531 bin=bin7_NC10_sister species=Nitrospina sp. SCGC AAA288-L16 genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=bin7_NC10_sister organism_group=NC10
NADH (or F420H2) dehydrogenase subunit C (EC:1.6.5.3)
13_1_40cm_2_scaffold_1998_13
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

10697..12067
DNA (1371bp) protein (457aa)
nuoD; NADH dehydrogenase I subunit D; K00333 NADH-quinone oxidoreductase subunit D [EC:1.6.5.3] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
NADH dehydrogenase I subunit D (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit D id=2999356 bin=GWA2_OP3_52_12 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
13_1_40cm_2_scaffold_1998_14
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

12101..13918
DNA (1818bp) protein (606aa)
NADH-quinone oxidoreductase subunit F n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B34E5F
nuoF; NADH-quinone oxidoreductase chain F Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
nuoF; NADH-quinone oxidoreductase chain F
13_1_40cm_2_scaffold_1998_15
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

13906..15381
DNA (1476bp) protein (492aa)
Molybdopterin oxidoreductase Fe4S4 region Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
NADH dehydrogenase I, G subunit (75 kDa) id=3990316 bin=GWC2_Methylomirabilis_70_16 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Molybdopterin oxidoreductase Fe4S4 region
Displaying 15 items

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