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13_1_40cm_2_scaffold_23238

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_23238_1
unknown

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comp(2..250)
DNA (249bp) protein (83aa)

This feature has no annotations

13_1_40cm_2_scaffold_23238_2
R_Acidobacteria_68_18, Acidobacteria, Bacteria

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comp(282..1076)
DNA (795bp) protein (265aa)
hypothetical protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI0003680020
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
hypothetical protein
13_1_40cm_2_scaffold_23238_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(1205..1945)
DNA (741bp) protein (247aa)
Endonuclease/exonuclease/phosphatase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IUE9_KORVE
Metal-dependent hydrolase {ECO:0000313|EMBL:CDM66919.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
13_1_40cm_2_scaffold_23238_4
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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2071..3417
DNA (1347bp) protein (449aa)
C4-dicarboxylate ABC transporter n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE6F8 rbh
Uncharacterized protein {ECO:0000313|EMBL:AII10989.1}; TaxID=37919 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (Nocardia opaca).;"
Conserved putative membrane protein
13_1_40cm_2_scaffold_23238_5
unknown

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3579..3827
DNA (249bp) protein (83aa)

This feature has no annotations

13_1_40cm_2_scaffold_23238_6
Dethiobacter alkaliphilus, Dethiobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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3905..4828
DNA (924bp) protein (308aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=555088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Dethiobacte
Cysteine synthase A n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GH55_9FIRM
cysteine synthase
13_1_40cm_2_scaffold_23238_7
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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4832..6241
DNA (1410bp) protein (470aa)
30S ribosomal protein S1 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q027A8_SOLUE
30S ribosomal protein S1
SSU ribosomal protein S1P {ECO:0000313|EMBL:ABJ82905.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usita
13_1_40cm_2_scaffold_23238_8
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6476..7690)
DNA (1215bp) protein (405aa)
hypothetical protein n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B4E0AE
Uncharacterized protein {ECO:0000313|EMBL:ETW98698.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
Fe-S oxidoreductase
13_1_40cm_2_scaffold_23238_9
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

7755..8483
DNA (729bp) protein (243aa)
ABC-type multidrug transport system, ATPase component id=3761784 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Desulfovibrio magneticus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
ABC transporter-like protein; K09695 lipooligosaccharide transport system ATP-binding protein Tax=GWB1_Bdellovibrionales_55_8_curated
ABC transporter ATP-binding protein
13_1_40cm_2_scaffold_23238_10
CG_ACD39_01, ACD39, Bacteria

Not on your lists

8508..8825
DNA (318bp) protein (106aa)
ABC transporter Tax=CG_ACD39_01
ABC-2 type transporter, transmembrane subunit id=2487253 bin=GWA1_Deltaproteobacteria_52_35 species=Methanococcoides burtonii genus=Methanococcoides taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
hypothetical protein
13_1_40cm_2_scaffold_23238_11
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

8843..9211
DNA (369bp) protein (123aa)
Nodulation protein J Tax=GWA1_Bdellovibrionales_52_35_curated
ABC-2 type transporter, transmembrane subunit id=2487253 bin=GWA1_Deltaproteobacteria_52_35 species=Methanococcoides burtonii genus=Methanococcoides taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
ABC transporter permease
Displaying 11 items

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