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13_1_40cm_2_scaffold_2356

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_2356_1
unknown

Not on your lists

comp(245..667)
DNA (423bp) protein (141aa)

This feature has no annotations

13_1_40cm_2_scaffold_2356_2
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

comp(664..1842)
DNA (1179bp) protein (393aa)
Molybdopterin biosynthesis protein n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L1P7_THERP
molybdopterin biosynthesis protein MoeB
Molybdopterin biosynthesis protein {ECO:0000313|EMBL:ACM05410.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum
13_1_40cm_2_scaffold_2356_3
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1964..2647)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C4J1_NITHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADE15175.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophil
13_1_40cm_2_scaffold_2356_4
unknown

Not on your lists

comp(2608..2913)
DNA (306bp) protein (102aa)

This feature has no annotations

13_1_40cm_2_scaffold_2356_5
unknown

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3159..3317
DNA (159bp) protein (53aa)

This feature has no annotations

13_1_40cm_2_scaffold_2356_6
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

3429..4016
DNA (588bp) protein (196aa)
haloacid dehalogenase id=14426039 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Omnitrophica tax=bin1_lowGC organism_group=Unknown_CP
haloacid dehalogenase Tax=CSP1_2_Dadabacteria
HAD superfamily hydrolase
13_1_40cm_2_scaffold_2356_7
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(4280..5419)
DNA (1140bp) protein (380aa)
dinB; DNA polymerase IV, devoid of proofreading, damage-inducible protein P (EC:2.7.7.7) Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
dinB; DNA polymerase IV, devoid of proofreading, damage-inducible protein P (EC:2.7.7.7) id=14429463 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
dinB; DNA polymerase IV, devoid of proofreading, damage-inducible protein P (EC:2.7.7.7)
13_1_40cm_2_scaffold_2356_8
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(5452..5901)
DNA (450bp) protein (150aa)
BadM/Rrf2 family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
BadM/Rrf2 family transcriptional regulator id=14431452 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
BadM/Rrf2 family transcriptional regulator
13_1_40cm_2_scaffold_2356_9
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

6169..9840
DNA (3672bp) protein (1224aa)
Chromosome partition protein Smc n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SFV1_9BACT rbh
condensin subunit Smc; K03529 chromosome segregation protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
chromosome segregation protein SMC
13_1_40cm_2_scaffold_2356_10
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

10085..10963
DNA (879bp) protein (293aa)
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};;
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01VW2_SOLUE
13_1_40cm_2_scaffold_2356_11
RBG_16_Aminicenantes_66_30_curated, Aminicenantes, Bacteria

Not on your lists

10960..11481
DNA (522bp) protein (174aa)
colicin V production protein; K03558 membrane protein required for colicin V production id=17289179 bin=RBG_16_Aminicenantes_66_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
colicin V production protein; K03558 membrane protein required for colicin V production Tax=RBG_16_Aminicenantes_66_30_curated
colicin V production protein
13_1_40cm_2_scaffold_2356_12
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

11505..11714
DNA (210bp) protein (70aa)
Transcriptional regulator, Fis family n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01VW0_SOLUE
response regulator receiver protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
Fis family transcriptional regulator
13_1_40cm_2_scaffold_2356_13
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(11740..12711)
DNA (972bp) protein (324aa)
Ornithine cyclodeaminase {ECO:0000313|EMBL:AEI50166.1}; EC=4.3.1.12 {ECO:0000313|EMBL:AEI50166.1};; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" s
Ornithine cyclodeaminase n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EM66_RUNSL
ornithine cyclodeaminase
13_1_40cm_2_scaffold_2356_14
Halanaerobium praevalens, Halanaerobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12689..13744)
DNA (1056bp) protein (352aa)
UvrABC system protein C n=1 Tax=Halanaerobium praevalens (strain ATCC 33744 / DSM 2228 / GSL) RepID=E3DR29_HALPG
excinuclease ABC subunit C
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_0
13_1_40cm_2_scaffold_2356_15
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(13756..14658)
DNA (903bp) protein (301aa)
Putative esterase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LK92_CHLTF
esterase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
putative esterase
13_1_40cm_2_scaffold_2356_16
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(14663..15010)
DNA (348bp) protein (116aa)
Alkylhydroperoxidase AhpD family core domain protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LK93_CHLTF
alkylhydroperoxidase AhpD family core domain-containing protein Tax=RBG_16_Acidobacteria_70_10_curated
alkylhydroperoxidase AhpD family core domain-containing protein
13_1_40cm_2_scaffold_2356_17
unknown

Not on your lists

15038..15217
DNA (180bp) protein (60aa)

This feature has no annotations

13_1_40cm_2_scaffold_2356_18
RLO_PLX_64_10, Bacteria

Not on your lists

comp(15301..16056)
DNA (756bp) protein (252aa)
Metal-dependent phosphohydrolase, HD protein n=1 Tax=uncultured bacterium RepID=K2BKQ1_9BACT
metal dependent phosphohydrolase Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
metal dependent phosphohydrolase
13_1_40cm_2_scaffold_2356_19
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

16156..17538
DNA (1383bp) protein (461aa)
Beta-lactamase domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01Q87_SOLUE
beta-lactamase domain-containing protein
Beta-lactamase domain protein {ECO:0000313|EMBL:ABJ88183.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter u
13_1_40cm_2_scaffold_2356_20
Turneriella parva, Turneriella, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

17574..17846
DNA (273bp) protein (91aa)
Acylphosphatase n=1 Tax=Turneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H) RepID=I4B5M4_TURPD
Acylphosphatase
Acylphosphatase {ECO:0000313|EMBL:AFM12581.1}; TaxID=869212 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Turneriella.;" source="Turneriella parva (strain ATCC BAA-1111 / DSM 21527 /
13_1_40cm_2_scaffold_2356_21
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

17848..18363
DNA (516bp) protein (172aa)
adenine phosphoribosyltransferase (EC:2.4.2.7) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
adenine phosphoribosyltransferase (EC:2.4.2.7)
Adenine phosphoribosyltransferase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LK20_CHLTF
13_1_40cm_2_scaffold_2356_22
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

18482..20902
DNA (2421bp) protein (807aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium BAC10-10 RepID=Q4JIN6_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
hypothetical protein
13_1_40cm_2_scaffold_2356_23
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

20947..22266
DNA (1320bp) protein (440aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium 70 RepID=E3T6J2_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hypothetical protein
13_1_40cm_2_scaffold_2356_24
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

22277..23734
DNA (1458bp) protein (486aa)
Ankyrin 23/unc44-like protein n=1 Tax=uncultured bacterium 70 RepID=E3T6J4_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
hypothetical protein
13_1_40cm_2_scaffold_2356_25
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23793..24890)
DNA (1098bp) protein (366aa)
hypothetical protein, partial n=2 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI000375419C
Uncharacterized protein {ECO:0000313|EMBL:ETX07127.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
methionine synthase, vitamin-B12 independent
13_1_40cm_2_scaffold_2356_26
Acidobacteriaceae bacterium KBS 96, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

24974..25663
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037C225A
13_1_40cm_2_scaffold_2356_27
unknown

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25808..25984
DNA (177bp) protein (59aa)

This feature has no annotations

13_1_40cm_2_scaffold_2356_28
unknown

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comp(26087..26341)
DNA (255bp) protein (85aa)

This feature has no annotations

Displaying 28 items

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