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13_1_40cm_2_scaffold_2544

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_2544_1
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(10..3168)
DNA (3159bp) protein (1053aa)
isoleucyl-tRNA synthetase Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
Isoleucine--tRNA ligase id=4589769 bin=GWC2_Ignavibacteria_56_12 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome rbh
isoleucyl-tRNA synthetase
13_1_40cm_2_scaffold_2544_2
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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comp(3242..4282)
DNA (1041bp) protein (347aa)
Protein RecA n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IV37_KORVE
recA; recA protein; K03553 recombination protein RecA Tax=RBG_16_Acidobacteria_70_10_curated
recA protein
13_1_40cm_2_scaffold_2544_3
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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comp(4293..5441)
DNA (1149bp) protein (383aa)
Putative TPR domain protein n=1 Tax=uncultured marine microorganism HF4000_097M14 RepID=B3T1W7_9ZZZZ
TPR repeat-containing protein Tax=RBG_13_Acidobacteria_68_16_curated
conserved protein of unknown function [Tetratricopeptide repeat][sel1-domain]
13_1_40cm_2_scaffold_2544_4
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5502..6350)
DNA (849bp) protein (283aa)
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIH2_KORVE
3-hydroxyacyl-CoA dehydrogenase Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
3-hydroxyacyl-CoA dehydrogenase
13_1_40cm_2_scaffold_2544_5
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

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comp(6363..7541)
DNA (1179bp) protein (393aa)
acetyl-CoA acetyltransferase family protein; K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
Acetyl-CoA acetyltransferase family protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1FAB1_ACIC5
acetyl-CoA acetyltransferase family protein
13_1_40cm_2_scaffold_2544_6
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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comp(7739..8845)
DNA (1107bp) protein (369aa)
TonB family protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q029J5_SOLUE
TonB family protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
TonB family protein
13_1_40cm_2_scaffold_2544_7
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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9102..9602
DNA (501bp) protein (167aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112508};; Prolipoprotein signal pep
Lipoprotein signal peptidase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQI9_KORVE
signal peptidase II
13_1_40cm_2_scaffold_2544_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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9577..10497
DNA (921bp) protein (307aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source=
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037E024A
pseudouridine synthase
13_1_40cm_2_scaffold_2544_9
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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11077..11991
DNA (915bp) protein (305aa)
hypothetical protein; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] Tax=RBG_16_Deltaproteobacteria_54_11_curated
UDP-glucose 4-epimerase (EC:5.1.3.2)
NAD-dependent epimerase/dehydratase n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XUR4_9BACT
Displaying 9 items

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