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13_1_40cm_2_scaffold_2751

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_2751_1
CG_Arma_02, Armatimonadetes, Bacteria

Not on your lists

comp(3..1541)
DNA (1539bp) protein (513aa)
SNF2-related protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3DDA
SNF2-like protein Tax=CG_Arma_02
superfamily II DNA/RNA helicase
13_1_40cm_2_scaffold_2751_2
unknown

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1586..1912
DNA (327bp) protein (109aa)

This feature has no annotations

13_1_40cm_2_scaffold_2751_3
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

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2107..2394
DNA (288bp) protein (96aa)
Putative uncharacterized protein n=1 Tax=Oscillatoria sp. PCC 6506 RepID=D8G9P6_9CYAN
hypothetical protein Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
hypothetical protein
13_1_40cm_2_scaffold_2751_4
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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2397..2756
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Cylindrospermum stagnale PCC 7417 RepID=K9X6D9_9NOST
Uncharacterized protein {ECO:0000313|EMBL:ETX07905.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
hypothetical protein
13_1_40cm_2_scaffold_2751_5
RBG_13_Deltaproteobacteria_49_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3173..3664)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4T1W3_META2
hypothetical protein Tax=RBG_13_Deltaproteobacteria_49_15_curated
hypothetical protein
13_1_40cm_2_scaffold_2751_trna_1
unknown

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comp(3780..3853)
DNA (74bp)
transferRNA
13_1_40cm_2_scaffold_2751_6
unknown

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comp(3896..4357)
DNA (462bp) protein (154aa)

This feature has no annotations

13_1_40cm_2_scaffold_2751_7
CG_Nitrosp_02, Nitrospirae, Bacteria

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4635..6350
DNA (1716bp) protein (572aa)
phosphotransferase domain-containing protein; K02347 DNA polymerase (family X) Tax=CG_Nitrosp_02
PHP C-terminal domain protein id=3240183 bin=GWF2_Nitrospirae_44_13 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae rbh
phP C-terminal domain-containing protein
13_1_40cm_2_scaffold_2751_8
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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6347..7435
DNA (1089bp) protein (363aa)
hypothetical protein id=14425901 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein Tax=CSP1_2_Dadabacteria
4Fe-4S ferredoxin
13_1_40cm_2_scaffold_2751_9
unknown

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comp(7371..7772)
DNA (402bp) protein (134aa)

This feature has no annotations

13_1_40cm_2_scaffold_2751_10
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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7849..9252
DNA (1404bp) protein (468aa)
hom; homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579, ECO:0000313|EMBL:CBK43783.1}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579, ECO:0000313|EMBL:CBK43783.1};; TaxID=330214 species="Bacteria; Nitrosp
Homoserine dehydrogenase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P8F1_9BACT
13_1_40cm_2_scaffold_2751_11
Thermoanaerobacter kivui, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9284..10540)
DNA (1257bp) protein (419aa)
Diguanylate cyclase/phosphodiesterase domain 1 (GGDEF) n=1 Tax=Thermoanaerobacter tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) RepID=Q8R7R3_THETN
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:AIS53232.1}; TaxID=2325 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobact
13_1_40cm_2_scaffold_2751_12
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

11055..12440
DNA (1386bp) protein (462aa)
dihydropyrimidinase (EC:3.5.2.2); K01464 dihydropyrimidinase [EC:3.5.2.2] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
hydA; dihydropyrimidinase (EC:3.5.2.2)
hypothetical protein n=1 Tax=SAR406 cluster bacterium SCGC AB-629-J13 RepID=UPI0003607E9E rbh
13_1_40cm_2_scaffold_2751_13
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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12492..13361
DNA (870bp) protein (290aa)
beta-alanine synthase (EC:3.5.1.6); K12251 N-carbamoylputrescine amidase [EC:3.5.1.53] Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
Beta-alanine synthase id=4296753 bin=GWC2_Ignavibacteria_38_9 species=Phycisphaera mikurensis genus=Phycisphaera taxon_order=Phycisphaerales taxon_class=Phycisphaerae phylum=Planctomycetes tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
13_1_40cm_2_scaffold_2751_14
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

13387..14427
DNA (1041bp) protein (347aa)
methylenetetrahydromethanopterin reductase; K00320 coenzyme F420-dependent N5,N10-methenyltetrahydromethanopterin reductase [EC:1.5.99.11] Tax=GWC2_RIF_CHLX_73_18_curated
methylenetetrahydromethanopterin reductase (EC:1.5.99.11)
5,10-methylenetetrahydromethanopterin reductase id=4549155 bin=GWC2_Chloroflexi_73_18 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
13_1_40cm_2_scaffold_2751_15
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14525..14734
DNA (210bp) protein (70aa)
Sec-independent protein translocase protein TatA id=1900763 bin=GWD2_Deltaproteobacteria_55_8 species=Flexistipes sinusarabici genus=Flexistipes taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Sec-independent protein translocase protein TatA/E-like protein; K03116 sec-independent protein translocase protein TatA Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
tatA; twin-arginine translocation protein TatA
13_1_40cm_2_scaffold_2751_16
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(14809..16344)
DNA (1536bp) protein (512aa)
threonine dehydratase, biosynthetic; K01754 threonine dehydratase [EC:4.3.1.19] id=12557655 bin=CNBR_ACIDO species=Acidithiobacillus ferrivorans genus=Acidithiobacillus taxon_order=Acidithiobacillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
threonine dehydratase, biosynthetic; K01754 threonine dehydratase [EC:4.3.1.19] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
ilvA; threonine ammonia-lyase, biosynthetic (EC:4.3.1.19)
13_1_40cm_2_scaffold_2751_17
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(16503..16718)
DNA (216bp) protein (72aa)
carbon monoxide dehydrogenase large subunit n=1 Tax=Herbaspirillum lusitanum RepID=UPI000361F44B
aerobic-type carbon monoxide dehydrogenase large subunit CoxL/CutL-like protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
putative aldehyde dehydrogenase
Displaying 18 items

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