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13_1_40cm_2_scaffold_2789

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_2789_1
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(133..1602)
DNA (1470bp) protein (490aa)
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II (EC:6.2.1.3) Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Long-chain-fatty-acid--CoA ligase n=1 Tax=planctomycete KSU-1 RepID=I3IIM6_9PLAN rbh
AMP-dependent synthetase and ligase
13_1_40cm_2_scaffold_2789_2
unknown

Not on your lists

comp(1676..1957)
DNA (282bp) protein (94aa)

This feature has no annotations

13_1_40cm_2_scaffold_2789_3
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

2256..3260
DNA (1005bp) protein (335aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036B5433
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
putative periplasmic or secreted lipoprotein
13_1_40cm_2_scaffold_2789_4
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(3374..5065)
DNA (1692bp) protein (564aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B2EB3A
hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
outer membrane efflux protein
13_1_40cm_2_scaffold_2789_5
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(5189..6097)
DNA (909bp) protein (303aa)
MacB-like periplasmic core domain containing protein n=1 Tax=Desulfovibrio sp. X2 RepID=S7TGK5_9DELT
export ABC transporter permease; K02004 putative ABC transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
hypothetical protein
13_1_40cm_2_scaffold_2789_6
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

comp(6164..6748)
DNA (585bp) protein (195aa)
TetR family transcriptional regulator id=14424498 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
TetR family transcriptional regulator Tax=CSP1_2_Dadabacteria
TetR family transcriptional regulator
13_1_40cm_2_scaffold_2789_7
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6797..7195)
DNA (399bp) protein (133aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=uncultured bacterium RepID=K2BA29_9BACT
Glyoxalase/bleomycin resistance protein/dioxygenase Tax=RBG_16_Gammaproteobacteria_62_13__curated
glyoxalase/bleomycin resistance protein/dioxygenase
13_1_40cm_2_scaffold_2789_8
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7365..8582
DNA (1218bp) protein (406aa)
Putative uncharacterized protein n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1D102_MYXXD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF91291.1}; TaxID=246197 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococ
13_1_40cm_2_scaffold_2789_9
unknown

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8589..8936
DNA (348bp) protein (116aa)

This feature has no annotations

13_1_40cm_2_scaffold_2789_10
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

8976..10784
DNA (1809bp) protein (603aa)
Peptidase M28 n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q028V5_SOLUE
peptidase M28 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
peptidase M28
13_1_40cm_2_scaffold_2789_11
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

10788..11864
DNA (1077bp) protein (359aa)
periplasmic component of the Tol biopolymer transport system Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
Periplasmic component of the Tol biopolymer transport system id=1249965 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
periplasmic component of the Tol biopolymer transport system
13_1_40cm_2_scaffold_2789_12
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

11884..12117
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Deferribacter desulfuricans (strain DSM 14783 / JCM 11476 / NBRC 101012 / SSM1) RepID=D3PDG4_DEFDS
Putative regulatory protein, FmdB family Tax=RBG_16_Acidobacteria_70_10_curated
hypothetical protein
13_1_40cm_2_scaffold_2789_13
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(12139..13128)
DNA (990bp) protein (330aa)
Phosphotransacetylase {ECO:0000313|EMBL:CDM66979.1}; EC=2.3.1.8 {ECO:0000313|EMBL:CDM66979.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrin
phosphate acetyltransferase (EC:2.3.1.8)
Phosphate acetyltransferase id=4650245 bin=GWA2_Ignavibacteria_55_11 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
13_1_40cm_2_scaffold_2789_14
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(13134..14558)
DNA (1425bp) protein (475aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IL93_KORVE
two component, sigma54 specific, Fis family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
Fis family transcriptional regulator
13_1_40cm_2_scaffold_2789_15
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(14551..17382)
DNA (2832bp) protein (944aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacte
Multi-sensor signal transduction histidine kinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IL92_KORVE
multi-sensor signal transduction histidine kinase
13_1_40cm_2_scaffold_2789_16
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(17385..18011)
DNA (627bp) protein (209aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ILC8_KORVE
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
hypothetical protein
Displaying 16 items

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